Detail



ID : Ahg494062

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494062|fgenesh2_kg.7__3495__AT5G39260.1
Sequence
AAGCTAAAGT AAAAACAATA TCATTAAAGA GGTATAATAA TCATGAAATT GCTAGAAAAA ATGACATATG TAGAATGTTT TATGATAATA ATGGCGACTT GGTTCATGTT CATAAGTTAT GGTCATGGAG CCGATGTAGC CGAACCATCA CCTGGAACCA ACGGACTCGA TACTGCTTGG TATGATGCAC GAGCCACATA TTATGGTGAT ATCCATGGTA TAGGCACTGA ACTAGAGGGA GCTTGTGGAT ACGGTGATCC AAACAAACAT GGATATGGTC TAGCCACAGC GGCATTGAGC ACGGCGCTAT TCAACAACGG GGCCACATGT GGGGCTTGTT ACGAGATCAT GTGCGCTCCT AATCCACAAG GGTGTTTGTC TGGATCCATC AAGATCACAG CAACAAATTT ATGTCCACCA GATTCCACTT GGTGCAACCT ACCAAATAAA CACTTTGATC TCTCCTTACC AATGTTCATC AAGATCGCCC AGGTCAAAGC CGGGATCGTC CCGATTAGAT ATAGACGTGT TCCTTGTGCA AAAACCGGTG GTGTCAAGTT TGAAGTTAAA GGAAACCCTA GTTTCCTAAC GATCTTACCG TACAATGTAG GAGGAGCCGG AGATATTAAA GCCGTGTATG TTAAGGGAAG CAAAACCGGG TGGATAGCAA TGAGCAGAAA CTGGGGACAA AACTGGACCA CTAATGTTAA TCTAGCCGGT CAGAGTGTAT CATTGAGGGT TACAACGAGT GATGAGGTTA CAAAAGATTT TACTGATGTG ATGCCACAAA GTTGGGGATT TGGGCAGACT TTTGATGGAA AGACTAACTT TTAAGAAAAA TGAAATGAAT TTTTTTAGTT TTGGCCTACA AGTTATTACT AAAGAGAGAT GTATTGGTTG CAATAATTAA AAATAAATGA AATATTGTTT ATGAT 
Length935
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21935495.. 21936591
Download Sequence
A.thaliana
AGI-codeAT5G39260.1
Descriptionexpansin A21
TAIR curator summaryexpansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP21][ATEXPA21][ATHEXP ALPHA 1.20][EXP21][EXPA21][expansin A21][EXPANSIN 21]
Gene coexpression
MR
MR Locus Description
8 Ahg936218
14.5945 Ahg929994
21.7715 Ahg483635 Matrixin family protein
28.3019 Ahg933437 Galactose oxidase/kelch repeat superfamily protein
28.4605 Virus1454
28.9828 Ahg929871 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
33.2265 Ahg935971
37.1753 Ahg917822 nitrate transporter 2.4
40.9878 Ahg484938 RING/U-box protein with C6HC-type zinc finger
44.3509 Ahg919129 CCT motif family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression