Detail



ID : Ahg485023

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485023|fgenesh2_kg.5__1015__AT3G46520.1
Sequence
CTAGAGATTG AAAAATGGCG GACGGTGAAG ATATTCAGCC GCTCGTATGC GATAACGGTA CTGGAATGGT CAAGGCCGGT TTTGCAGGTG ATGATGCTCC AAGAGCTGTA TTCCCAAGTA TCGTTGGGCG TCCGCGTCAC ACGGGAGTAA TGGTTGGAAT GGGACAAAAG GATGCATATG TTGGAGACGA AGCACAGTCG AAACGTGGTA TCTTGACTCT CAAGTATCCA ATTGAACATG GTATTGTTAA CAATTGGGAT GATATGGAGA AGATCTGGCA TCACACTTTC TACAACGAGC TGCGAGTCGC CCCGGAAGAA CATCCGGTTC TGCTAACCGA AGCGCCGCTC AATCCAAAGG CTAACCGTGA GAAGATGACA CAGATCATGT TTGAAACATT TAACACTCCT GCTATGTATG TTGCCATTCA AGCTGTTCTC TCCCTCTATG CCAGTGGCCG TACTACTGGT ATTGTTTTGG ACTCTGGAGA TGGTGTGAGC CACACGGTAC CAATCTACGA GGGTTATGCA CTTCCACACG CAATCCTGCG TCTTGATCTT GCGGGTCGTG ATCTAACCGA CCACCTGATG AAAATCCTGA CAGAGCGTGG TTACTCTTTC ACCACAACTG CTGAGCGTGA AATTGTTAGA GACATGAAGG AGAAGCTCTC TTACATTGCC TTGGACTACG AGCAAGAGCT TGAGACTTCC AAAACAAGCT CATCTGTCGA GAAGAGCTTC GAGCTGCCAG ACGGTCAAGT GATAACCATC GGGGCAGAGC GTTTCCGGTG CCCTGAAGTT CTGTTCCAGC CATCGATGAT CGGAATGGAA AATCCGGGAA TCCATGAAAC TACTTACAAT TCAATCATGA AATGTGATGT GGATATCAGG AAGGATCTTT ATGGAAACAT TGTGCTTAGT GGTGGAACCA CAATGTTCGG CGGGATTGGT GACAGGATGA GTAAAGAGAT CACCGCGTTG GCTCCAAGCA GTATGAAGAT CAAAGTGGTG GCTCCACCGG AAAGGAAGTA CAGTGTTTGG ATTGGTGGCT CTATCTTGGC CTCCCTCAGT ACTTTCCAGC AGATGTGGAT TGCGAAAGCC GAGTATGATG AATCTGGACC GTCGATCGTC CACAGGAAGT GCTTCTAATC AAATATCACC AAGTAAAACA AGTGCGGTAA AAATTTTGAG ATCAGTTTTT CACCCTGAAG CCAGTTGCTA TAATTACTTA CAACTCCTAT ATTTGTGTTC TTTTATTCTT CTCCCTCATT GTTCATTTTA ATCTCTCTTT TGCAACAAAA CAAGTTAAAA AAAAACACAG ATCAGTCATT AACAGAATGT TATTATTATA TGTATACATA TTCGTATACA CACATTATCT T 
Length1381
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12061038.. 12063750
Download Sequence
A.thaliana
AGI-codeAT3G46520.1
Descriptionactin-12
TAIR curator summaryMember of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development.
Alias[ACT12][actin-12]
Gene coexpression
MR
MR Locus Description
24 Ahg496065 actin 4
48.775 Ahg926787
56 Ahg488928 blue-copper-binding protein
87.8749 Ahg901222 homeobox-3
97.0721 Ahg904679
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression