Detail



ID : Ahg485055

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485055|fgenesh2_kg.5__1047__AT3G46830.1
Sequence
ACCGTATATT CACTTTATTG CTCCTCTCCT CTTTCTCTCT CGAAGAAGAA GACGAAGCCC AACAAATTAA ACAAGAAATT TTCCATTTTG AGAACAAACA TTTAAAGCCT CTCTTAATCA AAGTTTCGTC CTTTATAGAT CTGAAAAACT CGATTTTTTT TTCTCGATTC ATCCGCCATT AAGGTACACG AATCGTTATT GCGAGATCGG AGAGTGAAGG AGAAAAATGA CGCATAGAGT AGATCAAGAA TATGATTATT TGTTTAAGAT TGTGTTGATT GGTGATTCTG GTGTTGGGAA ATCGAATATC TTGTCGAGAT TCACCAGGAA TGAGTTTTGC TTGGAGTCTA AATCCACTAT TGGTGTTGAA TTCGCTACCA GAACTACTCA GGTTGAAGGA AAGACAATTA AGGCCCAGAT CTGGGACACT GCAGGTCAGG AGCGGTACAG GGCAATCACC AGTGCTTATT ACAGAGGCGC AGTGGGTGCA CTTCTTGTCT ATGACATTAC CAAGAGACAG ACTTTTGACA ATGTTTTAAG GTGGCTGCGT GAACTGAGAG ACCATGCAGA TTCCAACATT GTGATCATGA TGGCTGGGAA CAAATCCGAT CTGAACCACT TGAGATCCGT TGCTGAGGAA GATGGTCAGA GTTTGGCTGA GAAGGAAGGT CTCTCTTTCC TGGAGACATC AGCTCTTGAA GCAACAAACG TTGAGAAAGC GTTTCAGACC ATCTTAGGAG AGATCTACCA TATCATAAGC AAAAAGGCAC TGGCTGCACA AGAAGCAGCA GCAGCTAATT CCGCAATTCC TGGGCAAGGA ACTACGATTA ACGTTGATGA CACATCTGGA GGCGCGAAAA GGGCATGTTG CTCTTCTTAA ACTAAAGGTA AACTGTTTAC TTCGTTTGTT CCTTCTTCAA AGATTCAAAC TTTTGTTTTC ACTGGCTTCT CTTCTTTTCA AGTTTTGGCT GATGAAACGT AACTATGCAA GACTATGTAG AATACTCTGT TTTTATGCTC TTCGGTTGGG GTTTGTGTTC AGTTTAAAGC TTGTTAGTAG TGTACTTAGA ATCTTCTGGT GCTTGCTTTT GGCGTGTTTC TCTTCATTTC TGGTTTATAA AGTATTTTTA CATCTCCGGT TTATTCCGGT TCGTCTTGGC TTGGTTTAAT CAAATCATTG ATTCATCTCT TAT 
Length1193
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12214110.. 12216441
Download Sequence
A.thaliana
AGI-codeAT3G46830.1
DescriptionRAB GTPase homolog A2C
TAIR curator summary
Alias[ATRAB-A2C][ATRAB11A][ATRABA2C][RAB-A2C][RABA2c][ARABIDOPSIS RAB GTPASE HOMOLOG A2C][RAB GTPase homolog A2C][RAB GTPASE HOMOLOG A2C]
Gene coexpression
MR
MR Locus Description
10.4881 Ahg478504
10.9545 Ahg917191 RAN GTPase 3
11.8322 Ahg472250 PAM domain (PCI/PINT associated module) protein
12.6886 Ahg475037 GPI transamidase subunit PIG-U
15.4919 Ahg476749 PAM domain (PCI/PINT associated module) protein
17.8885 Ahg489491 Glutamyl/glutaminyl-tRNA synthetase, class Ic
19.2354 Ahg472663 Protein kinase superfamily protein
22.0454 Ahg473598 Protein of unknown function (DUF803)
27.9285 Ahg482355 maternal effect embryo arrest 18
28.1425 Ahg947046 Ypt/Rab-GAP domain of gyp1p superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression