Detail



ID : Ahg917191

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917191|Al_scaffold_0008_1942
Sequence
ATGCTCTATG GGAAGAAAGT CTTTGTTTTT GTCGTCACTC CAGAACCCAC TATTGGTGTT GAGGTCCATC CTCTTGATTT CTTCACTAAC TGTGGCAAGA TCCGTTTTTA CTGTTGGGAT ACTGCTGGCC AAGAGAAATT TGGTGGTCTG AGGGATGGTT ACTATATCCA TGGGCAATGT GCCATCATCA TGTTTGATGT CACAGCACGT CTGACATACA AGAATGTTCC AACATGGCAC CGTGATCTTT GCAGGGTCTG TGAAAACATC CCAATTGTTC TTTGTGGGAA TAAAGTTGAT GTGAAGAACA GGCAAGTCAA GGCCAAGCAA GTAACATTCC ACAGGAAGAA GAATCTCCAG TATTACGAAA TATCTGCCAA GAGCAACTAC AATTTCGAGA AGCCATTCTT GTACCTTGCT AGAAAATTGG CTGGCGACCA AAACCTTCAC TTTGTCGAGT CACCCGCGCT TGCTCCACCA GAGGTTCACA TCGACCATGC TGCTCAGCAG AAGAACGAGG CCGATCTCAT TGCGGCGGCA AGTCAGCCAC TCCCGGATGA TGATGACGAT GCTTTCGAGT AA 
Length582
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15828693.. 15830025
Download Sequence
A.thaliana
AGI-codeAT5G55190.1
DescriptionRAN GTPase 3
TAIR curator summaryA member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.
Alias[ATRAN3][RAN3][RAN GTPASE 3][RAN GTPase 3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg324433 O-acetylserine (thiol) lyase isoform C
10.9545 Ahg485055 RAB GTPase homolog A2C
13.2665 Ahg496352 Exostosin family protein
18.1108 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
20.347 Ahg946737 Proteinase inhibitor I25, cystatin, conserved region
33.0151 Ahg494537 Small nuclear ribonucleoprotein family protein
34.6699 Ahg933903 heat shock protein 60-2
34.8712 Ahg942410 Pre-rRNA-processing protein TSR2, conserved region
37.8814 Ahg487516 Protein of unknown function (DUF810)
39.3319 Ahg912745 NADH-ubiquinone dehydrogenase, mitochondrial, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression