Detail



ID : Ahg485089

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485089|fgenesh2_kg.5__1081__AT3G47130.1
Sequence
ATGTCAAGAA AGACAAAGTT ACGTCTAAAT CCTACACGGA TCTACATTCC TCTTGATCTC CAAATTAATA CACTCTTAAG ATTGCCTGTG AACCAATATT TCAAAAAACA GCACTTGAAC ATTACATCTT CCTCAGCTCC TCCACGTCTC CTCATTTCTT TTCAGGACTT TCACGGTAAA AATCTTATGT TAGTCTCGTC GCCTAACCCA TACGTATCTT CCTCTTCCTC TTCTTCATGT TGTGTACCCT ATAAAGATCT GAACGTCTTT AAAATAAATG GGAAACTAGT GTATAATGCG GTTCGGGGCT TGATCTGCTT AAGTAGATTA AGTGTGGGGA TTTGTAACCC TAGCACAAGG CAGCTGCATA TTTTTCCCCA ACTCAAGTAC AAAGAAGATC CAAAAAATTC TCAACGCCCC AATTATTTTG TTGGGTACGA TTCTATTGAA GATCAATACA AAGTGCTAGC AATTGATCGT TTGCATTGGA GAATGGAGCA TAAGATTCTG TTATTGGGAA GAGAAGAAGC TTGGAGAGAG GCTCCATGTG TTGCATGTCC TCATGTTTCT CATACCTCGG GGATGTATAT GAACGGAACC CTGTACTACG GGGCGTCTCG GACGGATATC GATCCCCCGA ATAACAATTC TATAATTGTT AGTTTCGATG TTAGGCTTGA AACGTTCAAC ATCATCAATG TACCAAGCAA AGTTCTACCA ATGGGTTATG AGAATATGTG GCTTGCTGAA CGGTGGAGGA ATCTTACAGA TAAAACTCTG ATCAACTACA AAGGAAAAAT TGGTGTGGTC GAGAATGCAC GTGAGGGTAG TTTTCGAATG TGGGTTGTGG AAGATGCTGA GAAAGAGGAA TGGTCCATGA ACACTTTTCA TTTGCCTGAA TCTGCTGTTG GCCTTGACTT CAAGGTCGAT CATGAATGCC TTTTATACAG GCGAGATTTG TCTGGTTCGA AAAGAATTAA CTGA 
Length984
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12452418.. 12453426
Download Sequence
A.thaliana
AGI-codeAT3G47130.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.3288 Ahg488855 GNOM-like 2
30.3315 Ahg929733 ROTUNDIFOLIA like 20
33.6155 Ahg924156 DNA-binding storekeeper protein-related transcriptional regulator
34.7275 Ahg473652 C2H2 and C2HC zinc fingers superfamily protein
36.0832 Ahg894341
36.6606 Ahg940450
40.1248 Ahg945488 Protein of unknown function (DUF295)
45.7275 Ahg914052 Peroxidase superfamily protein
50.1099 Ahg485653 purple acid phosphatase 21
53.3292 Ahg913214 phloem protein 2-A4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression