Detail



ID : Ahg473652

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473652|fgenesh2_kg.1__3606__AT1G34790.1
Sequence
TTTCATCACT CTCCAACCAC TATTCACCAC ATTCAATGGA GTCACCACTA TACGAGATAT CCTCAAGCTC TTCTTCTGAA AAACCTAGAA ACCATTTCCA ATCCCTTGAT CTCTTCCCTA ACCTCAACCA AAACTCTTGT AACAACAATA ACCTAATTGA GCCTTTACCG CTTATTGATC GGATAAACTT GAACTCAAAC CTAGACCTAA ACCCTAAGCC CTTGTATGCG GAAGAAGGAG AGCAAGAGGA GGAAGAAGAA GAAGAGGACG GTGAAGTGGA CGTGAACTTA CACATCGGCC TTCCTGGTTT TGGTAAATCA GGCGATGGTG CTAAAGAGCT GAAGAAGAAA AATGGGAAGG AGATCGCCAC ATATGATGCC GGAAAAGACA TTGAGAATGA AGTTTCCGGC AAGGCATACT GGATCCCGGC GCCGGAGCAA ATTCTCATAG GCTTCACTCA TTTTTCTTGC CATGTGTGCT TCAAGACATT CAATCGTTAC AATAATCTTC AGATGCACAT GTGGGGACAT GGTTCACAAT ACAGAAAAGG ACCAGAGTCA CTGAAAGGCA CGCAGCCACG AGCCATGTTA GGGATCCCTT GTTACTGCTG CGTCGAAGGG TGTAGGAACC ACATTGACCA TCCTCGTTCC AAGCCACTCA AAGACTTTAG AACGCTCCAA ACGCACTACA AACGCAAACA CGGCCACAAA CCCTTCTCGT GTCGCATTTG CGGTAAGCTT TTGGCTGTCA AGGGCGATTG GCGAACACAT GAGAAGAACT GTGGGAAACG TTGGGTTTGC GTTTGCGGTT CTGATTTTAA ACACAAACGT TCCCTTAAGG ACCATGTTAA AGCTTTTGGG CCTGGTCATG GGCCTTATCC GACTGGTTTG TTTGAAGAGC AGGCTTCTAA TTCATCTGTC TCCGAGACTT TGTTCTTTTA AATTTGGGCA TCTTTTTTAT TTGCTTATGG ACCATTTATT TACTTTAGAA TAATAATATG TGGTACCTAA TTGTTTCGAA TTAGGAATAC GAAGTGTACC ATTATATGTT TCATCTCTA 
Length1059
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15990530.. 15992391
Download Sequence
A.thaliana
AGI-codeAT1G34790.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summaryEncodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development.
Alias[TT1][WIP1][transparent testa 1][WIP domain protein 1]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg357471
15.4919 Ahg355455 DNA (cytosine-5-)-methyltransferase family protein
17.2627 Ahg951864
17.4356 Ahg942089
17.4929 Ahg358371 Pectin lyase-like superfamily protein
18.7617 Ahg948117
22.891 Ahg931870 vernalization5/VIN3-like
25.923 Ahg915157
28.4605 Ahg331780 C2H2-like zinc finger protein
34.7275 Ahg485089 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression