| Annotation |
|---|
| Description | jgi|Araly1|485366|fgenesh2_kg.5__1358__AT3G50080.1 |
| Sequence |
ATACTCAACC ACACAAAAAT GGGCCAAGCT CCGTCGTCTC CGGCGGATTC AAGCGTACGC GATACTTATT TATGGCTCTG GTCACCGGAA TTTCTCGATT GCGAATCGAT TGGTTTCGAA GACGGAGATT ACGATTTCAC GGCAAATCTA CCAGACGATT GCCTCGCTCA TATCTTTCAA TTTCTCAGCG CCGGAGATCG GAAACGATGC TCTCTCAATC GTCACCGTTT ATCACTTGAT GCTAAATCTG AGATTCTCCC TTTCTTGCCT TGTATCTTCA ATCGGTTCGA TTCCGTAACA AAGCTCGCTC TTCGTTGTGA TCGGAGGTCT TTTAGCTTGA GCGATGAAGC TTTAGTCATG ATCTCGATTC GTTGCTCGAA TCTGATTCGA GTCAAGCTTC GTGGTTGTCG CGAGATTACG GATCTAGGAA TGGAATCGTT CGCTAGAAAC TGTAGGAACT TGAGGAAGCT ATCGTGTGGC TCTTGTAATT TCGGTGCAAA GGGATTAAAC GCGATGCTTG AGCATTGCAA GGTTCTTGAG GAGTTATCTG TGAAGAGAAT CAGAGGAATT GATGAATTGG CTGAGCCAAT TAAGGTGAGT TCGTCTTCTT CACTTAGAAC GATTTGTTTG AAGGAGCTTG TTAATGGTGA GGTATTTGAA TCTTTGGTTG CTACAACAAC TTTGAAAAAA CTTAGAATCA TTCGTTGTTT AGGTGATTGG GATAGAGTTC TTGAAATGAA TGGAGATGGG AATAGTTCTT TGACTGAGAT TCATCTGGAG AGGCTTCAAG TGAGTGATGT TGGACTCTCT GGTATATCTA AATGTTCAAA TTTAGAGACT TTGCATATAG TGAAAACCCC TGAATGTTCG AATATAGGTT TAGCTAGTGT TGTAGAGAGA TGTAAGTTAC TGAGAAAGCT TCATATTGAT GGTTGGAGGA TTAAGAGGAT CGGTGATGAA GGTTTGATGT CTGTAGCTAA GCACTGCTTG AATTTGCAAG AGCTTGTACT TATCGGTGTT GATGCGACGT ATATGAGCTT GTCAGCTATT GCTTCAAACT GTAAGAAGCT TGAACGGTTA GCTCTTTGTG GGAGTGGTAC GATTGGGGAC ACGGAGATTG GTTGTATCGC TGAGAAATGT GTGGCGCTGA GGAAATTCTG TATCAAGGGA TGTCTGATTT CAGATGTCGG GATCAAGGCG TTGGCTTTAG GCTGTCCTAA GCTGGTGAAA CTGAAAGTGA AGAAATGTAG ATTGGTTACA GGTGAAGTTA GGGAATGGCT GCGTGAACGG AGGATGACGT TGGTGGTGAG TATGGATGAT GATGAAACCA GTGGTGTGGG TATTGTGGAT GGTGGTGATC AGAGAGTTCT TGAGACGGTA GCTGAGGAGG ATCCGCTGCC GGTGACTGAT GGTGATGGTG GTGCGGGGGT TGCAGGTGGT GGGAGAATAG GGTTAGCTAT CTTAAAGACA AAGTTAGGGT TACTTGCAGG AAGGAACTTG GTTGCTTGTA CGTTTAGGAG ATGGTCTCAA AGTGAAGCTA CTAGTTCCAT TTGATTGAAA ACAAAGGGTC TTTGTGCATT CAGAACAAAA ACCTACTTCT GTATATTATT TCTTGTTTCC TATGTTGATA ATCTTCACAA TTCATTTTCA AA |
| Length | 1652 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14122318.. 14124003 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G50080.1 |
| Description | VIER F-box proteine 2 |
| TAIR curator summary | Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. |
| Alias | [VFB2][VIER F-box proteine 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg479993 | Protein of unknown function (DUF1644) |
| 12 |
Ahg932741 | |
| 17.4356 |
Ahg478622 | A20/AN1-like zinc finger family protein |
| 18.2483 |
Ahg473144 | plant U-box 17 |
| 18.9737 |
Ahg495654 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 19.4422 |
Ahg951374 | LMBR1-like membrane protein |
| 21.2368 |
Ahg938368 | SKP1/ASK-interacting protein 5 |
| 32.1248 |
Ahg488148 | ARF GTPase-activating protein |
| 33.1662 |
Ahg471074 | Cysteine proteinases superfamily protein |
| 33.1662 |
Ahg931886 | Calmodulin-binding protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
|
|