Detail



ID : Ahg938368

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938368|scaffold_502559.1
Sequence
TCATACTTCC TAAAGCGGCC ATGGAAATTC AAGAGATCTC AAAGCTCGAC AACGAGAAAC ATCCCGAGAG AATTGTCGAA TCAAGGATGA AGAAGAGAAT GAAACCTCAT TCTCTCACGT CTATTAACAA TCTCGACGAT GGTTGCCTCA TGCATATCCT CAGCTTCCTA TCTCCAATTC CAGATAGGTA TAACACAGCA CTCGTTTGCC ACAGATGGAG ATATCTGGCG TGTCACCCTC GCTTGTGGCT CCGTGTTGAC CGTTTTGTTA AGGATTTATC TCAGCCTGGA GTTTTCCACA ACATTGAGTC AGCTGTATCT GCAGCAAGAC CCGGCGATAC CATTTTAATA GGAGCCGGTG GCAATCATCG TGTTTCTAAT ATTCAGATTA AAAAGCCTCT TTGCCTGGTC GGCGGGGGCG AGATTCCTGA TGAAACCACC CTCGTCTGTG CTCGTGGTTC AGACAGTGCC CTGGAATTGC TATCGACCTG CAAGCTTGCG AATTTAACAG TCAAAGCAGA GCTCGGGTGC TGTTTGCTTC ATAGGAGTGG AAGGGTAACG ATTGATGGAT GTGTGCTTCA ATGTGAGACA AACCCTTTGG ATCATCTCTC ATGCCCAATC GTGAGCACTG CTGGAGATGA AGACATTGAA GATATCTTGA GCCATGTGGA AGTGAAAGAA ACTGTTGCTG AAAAGATTAA AGCAAACAGT GTAACAGTTT TGCAGACAAG GATCGAGGGA GGTGCAAAGG CTGTTTCGAC TAGTGGAGAC TTGGTTCTGC AGCGTGTTCG AGTCATGTAT TCCAAGGCTT ACCTCTATTT CTGGTTTGAT GTAGATTATC AATGATCTTT GCTGATTTTT TTATT 
Length865
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16096459.. 16098960
Download Sequence
A.thaliana
AGI-codeAT3G54480.1
DescriptionSKP1/ASK-interacting protein 5
TAIR curator summaryEncodes an SKP1 interacting partner (SKIP5).
Alias[SKIP5][SKP5][SKP1/ASK-interacting protein 5]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg946957 casein kinase I
7.54983 Ahg478948
17.5499 Ahg322489 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.2368 Ahg485366 VIER F-box proteine 2
23.8328 Ahg484241
26.4575 Ahg924037 Galactose oxidase/kelch repeat superfamily protein
26.5707 Ahg475241 U2 snRNP auxilliary factor, large subunit, splicing factor
28.4605 Ahg923469 isocitrate dehydrogenase 1
34.1906 Ahg472286 acyl activating enzyme 1
39.4968 Ahg933291 A20/AN1-like zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression