Detail



ID : Ahg485378

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485378|fgenesh2_kg.5__1370__AT3G50230.1
Sequence
ATGACACTCT TCTTCTACTC TCTTCTCTTC CTCCTCCGTA TCTCCGCCGC AAACTCCCTC CCAGCGACGA ACTACTTCGA CTCCTTCTTA CCTTCCGACG CCGTCGCACT TCTCTCCTTC AAATCCACCG CTGATCTCGA CAACAAGCTT CTATACTCTC TCACCGAGCC TTACGATTAC TGTCAATGGC GCGGCGTCGA CTGCTCTCAA GATCGCGTCG TTCGTCTTAT CCTCGACGGC GTTGGTCTCC GAGGACGTTT CTCACCGGAG ACTCTTAGTC GTCTTGATCA GCTTCGTGTT CTTAGCCTTG TGAATAACTC AATCTCTGGT TCGGTTCCTG ATCTATCTCC TTTAACCAAT CTCAAAACCC TAACCCTAAG CAAGAACCGT TTCTCCGGTA CTCTCTCTGG TTCGATTCTT TCTCTTCGCC GGTTAGTCGA ACTTGATCTA TCGTTTAACA ACTTCGCCGG TGAGATTCCG TCGGAGATCA ATGCTCTGAG TCGACTCATT TCTTTAAATC TCGAGTTTAA TCGATTCAGT GGTCCTCTCC CGCCGTTGAA TCATTCTTCT ATGACGTCGT TTAACGTTTC CGGTAACAAT CTCACCGGTT TAGTTCCGGT TACAACGACT CTGTTACGAT TCAACGCGTC TTCGTTTTCG TCAAACCCTG GACTCTGCGG TGAGATCATT AACCGATCTT GCGGTTCACG TTCTTCTTCT CCATTCTTCG GTTCAACTAA ACCAAACGCC ACGTCATCAT CTTCTTCGTC TCAAGCACCG ATTAGTCAAA GCGAGAACGG TGAAGCAGCG ATGATTGTTC CACCGGTGGT TAAAAAGGTT AAAAATGGTT GGTTAGTACT TGGTTTCACC ATTGGTCTCG CTTCTTTGAT AGTCCTCGGT CTTTGTCTCG TAGTGTTCTC GTTGTTTATG AAGAACCGGA GAGACTACGA CGATGACGTG ATAATGACGC AACCTAAACG AGAAGAAGGA AACAAAGAAA TCAAAATCCA ATTCCAAACC ACTGAGCCGT CGCCGCAAAA ACGAATCTCA AGAAACGGAG ATTTGATTTT CTGCGGCGAC GGAGGAGGAG TAGCTGTGTA TACACTTGAT CAGTTGATGA GAGCTTCTGC GGAGCTTTTT GGAAGAGGAT CAGTAGGTAC GACGTATAAA GCGGTGATGG TTAATCAACT GATTGTGACG GTGAAGAGAT TTGCTCCGTC GAAAACAGCG ATTACTAGTG ATTTAGCGTT TGAGAATCAG ATGGAGATAG TTGGTGGACT TAAGCATCCG AATCTTGTTC CGGTAAAAGC TTATTTTCAG TCAAATGGAG AGAGACTTGT CATCTATGAG TACCAACCTA ATGGAAGTCT CTTCAATCTT ATTCATGGTT CAAGAACATC AAAAGCTAAG CCATTACATT GGACATCATG CTTGAAGATA GCAGAAGATG TGGCTCAAGC ACTACATTAT ATTCACCAAT CATCAGGAAA ATTTCATGGA AACCTCAAGT CCACTAACAT CCTCCTTGGT CACGACTTCG AAGCTTGTGT CACAGATTAC TGTCTAAGTG TCTTAACAGA CTCATCAGTC CTCCCTAATG ACCCGGACAT CTCTTCCTAC AAAGCACCAG AGGTAAGGAA ATCAATAGAT AGTCGTCGTC CCACGTCCAA ATGCGATGTG TACTCGTTCG GGGTCTTCCT CTTAGAGCTA TTGACTGGTA AAACAGCTTC AAGACAACCG ATTATGGAGC CAAACGATAT GTTGGATTGG GTAAGAGCAA TGAGGCAAGA AGAGGAAAGG TCAAAGGAAG AGAATGGGCT AGAGATGATG ACTCAAACGG CTTGTCTTTG TCGTGCAACA TCGCCAGAGC AAAGGCCGAC TATGAAAGAA GTGATCAAAA TGATTCAAGA GATTAAGGAG AGTGTTGTGA TGACTGAAGA GAACGAAACT TTCCTCTGA 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14186814.. 14190035
Download Sequence
A.thaliana
AGI-codeAT3G50230.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg908321 Transmembrane amino acid transporter family protein
7.4162 Ahg941784 F-box associated ubiquitination effector family protein
12.3288 Ahg925187 ATP phosphoribosyl transferase 1
21.8632 Ahg919963
22.2711 Ahg472221 other RNA
25.219 Ahg937263
32.3574 Ahg942189 Plant self-incompatibility protein S1 family
32.4037 Ahg952288 Peroxidase superfamily protein
34.8712 Ahg345920 glycine-rich protein / late embryogenesis abundant protein (M17)
42.3202 Ahg338279 desulfo-glucosinolate sulfotransferase 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression