Detail



ID : Ahg486026

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486026|fgenesh2_kg.5__2018__AT3G55840.1
Sequence
AAAAAAAATG GCTGATTTGG ATTTACAGAG GAATATGGTA TCTCCAAAGC TCCACGTCAC TATTCCGGAG CCGTGTAAGC TCTCCTCCGT CTCTTCTCCA ATATCCTCCT CTTCTTCCGC CGCTTGCTCT GCCTACGAGC TTTACCTCCG TTTGCCGGAA CTTAGAAACC TCTGGTTCTC TCTCTATTTC CCTCACTGGA TCTCCGAGCC GGTTCTCAAA CCATCTCTTC AAGCTCTTGA GATCACTTTC CGATTAATCC TCACCGTTGC TTCTGACAGA CGTCCGTACA TCAACCGCCG CGAATGGATC CGACGGTTGG ATTCTCTCTC CACGAGCCAG ATCAAAATCG TGGCGGCTAT CTGCGAAGAT GAAGACTACG ACGACGATAA CGTATCGGCG GCTCCGGTCA GCAATGGCTG GAGCTCGTTG AGCTTGCTTT CGGAGATCGC CACGTGTCGT AGATCGGAGA GTGTTGGACA GAAGATTTTG TCTACGATCG AGAATGAGAT GCGTTGGTGT AAGTATACGC TCGGTTTAGG AGAACCAAAC CTCGCCGGAA AACCGTATCT TCAATACGAC GCCGTTTGTC GCCCGGAGGA GCTACACAGC CTTAAGAACA ATCCTTACTC TGATCACATC GAGAACCAAG AGAATCAAAT GCTCTACACT ATTCATCAGA TTCTTGAATC GTGGATTTAT GTTTCTGTGA ATCTTTTGTA TCGAATCGAA TCAAGAATCG AAGAGGGAAA ATTCGAAAAA GCTTCTTCTG ACGTGTACTT GCTAGAGAGA ATCTGGAAGC TTTTAACGGA GATAGAAGAT TTACACATTC TGATGGATCC TGAAGATTTC TTGAAGGTGA AGAAACAGTT ACAAATCAAA TCAACTTCTC CAAACGACGC GTTTTGTTTC AGGTCCAAGG GGCTAGTAGA GATGGCCAAG ATGTCGAAAG AGCTGAGACA GAAAGTGCCA GCTGTACTTG AGGTGGAGGT GGATCCCACC GGAGGTCCGA GGTTGCAAGA GGCAGCGATG AAGCTTTACT CAAGGAAGAC AGAGTACGAG AAGATACATT TGCTTCAGGG AATGCAGGCA GTCGAGTCGG CAGCGAAGAG ATTCTTCTTC GGGTACCAGA AGTTGGTTGC GGCCATGATT GGGAATGCGG AGGCGAATGC GAATAGAACC GTGGCGAATC ACGAGTCGTA TGATTCTCTG ACTCATGTGT TTATGGAGCC ACCGTATTAC CCGAGCCTAG ATGCCGCAAA GACATTTCTG GGAGAGTTCT GGAGCCAATT GTGATGCAAT GGACGATATT GATTGACACA GCGACTTAAC AAACACTATC AACAGATCTT ACACTACTTA AATTTTTGGA AGCATGTAAC GATCAGTGTA TGAATATATA ACTAATTCTT TTTTAGCACA AAACAATATT TTCACAGCAA CAGATGTTAC AAAAGGTACA ATGAGGGTAC ATCATGCACT AGGCTACTAC TATATCTCTT TGTAAGCTTC TACGAGAAAC CCCATAAGCC ACCAATTACA AACTTTCCCT CTCTATCTTC TCGCTTACCG TAAAAGTAAG ATCAGTTCTC TGGTTCAACT CTTACTTGGC ATCAAACCTG TCAATAGCTA GAACGTGAAG AGTAGTAGTA ACCAGTGGAA GAGAAAAGCG GAAATGTACC GCCATGTGAA AGCAGCAATC ACCAGAACCA TAAATTGCGG CTATCCACGG CTTTCATGGA AGAGTATACA AGTGGCATTA TCCCAAATTC TGCCACAAAC CGATTTACGC AGTGTGTTCT TTTTTCTGTG TGCCCTCCTA TGCTACTAAT TCCAGTT 
Length1837
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16700478.. 16702368
Download Sequence
A.thaliana
AGI-codeAT3G55840.1
DescriptionHs1pro-1 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.088 Ahg494930 RING/U-box superfamily protein
17.5784 Ahg494088 Thioredoxin superfamily protein
18.4932 Ahg476943 Protein of unknown function (DUF1644)
19.3649 Ahg929630 cyclic nucleotide-binding transporter 1
20.4939 Ahg921939 Target SNARE coiled-coil domain protein
22.9347 Ahg490282 F-box/RNI-like superfamily protein
23.1084 Ahg471506 Protein of unknown function (DUF1262)
24.3311 Ahg486595 BON association protein 1
26.2107 Ahg487707 Protein of unknown function (DUF668)
28.6356 Ahg322779 Protein of unknown function (DUF707)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression