| Annotation |
|---|
| Description | jgi|Araly1|929630|scaffold_302087.1 |
| Sequence |
GAAACCTTGA TTTTGGTCAA GAAATGGCTT CCCACAACGA AAACGATGAT ATTCCCATGC TTCCAATTTC AGACCCATCA TCTCGTACTA GAGCCAGAGC TTTCACTTCC AGGAGTCGTA GCGTTTCTCT CTCAAACCCT ACTTCCTCCA TTGAAGGATT TGACAATTCC ACTGTGGTTT TAGGCTACAC GGGTCCTCTT CGAACTCAGA GACGTCCTCC TTTAGTTCAA ATGAGTGGTC CTCTTACCTC TACTCGCAAA CCTGAACCTC TCTTTCTTCC TCATCCGTCT TCTGGTTCTT CTGATTCCGT TGGTGTCTCT TCTCAGCCTG AGAGGTATCC TTCTTTTGCT GCTCTTGAAC ATAAAAACTC CTCAGACGAT GAGTTCGTTT TGAAACACGC AAATCTCTTG AGGTCTGGAC AATTAGGGAT GTGTAATGAT CCTTACTGTA CTACTTGCCC TTCTTACTAC AACCGTAAGG CTGCTCAAAT CCCTACTTCT AGAGTTTCTG CCCTTTTTGA TTCCACGTTC CATAATGCTC TGTATGATGA TGCTAAAGGT TGGGCAAGGA GATTTGCTTC CTCTGTTAAT AGATACTTAC CTGGAATCAT GAATCCTCAT GCCAAAGAGG TTCAAACCTG GACTAAATTC TTCGCCCTTT CATGCTTGTT AGCTATTTTT ATAGATCCTC TCTTCTTCTT CCTCATAAAA GTCCAAGAGC AAAACAAATG CATTATGATT GATTGGCCGA TGACTAAAGC ATTTGTAGCT GTTAGAAGTG TAACAGATGT TATATTCACT ATGAACATTC TGCTTCAGTT CCGATTGGCC TACGTAGCTC GTGAGTCTAC GGTAGTTGGT GCTGGCCAGT TAGTTAGTCA TCCCAAAAAA ATTGCCCTTC ATTACTTTAG AGGAAAGTTT TTCCTTGACT TGTTCATAGT GATGCCACTT CCACAGATAT TGATTTTATG GATAATACCA GAACATTTGG GTGCATCCGG GGCAAACTAT GCGAAAAACC TTCTACGAGC TGCAGTTCTT TTCCAATACA TTCCAAAGTT ATATAGACTT CTACCATTTC TTGCTGGACA AACACCGACC GGATTCATAT TTGAGTCAGC TTGGGCTAAT TTTGTTATTA ATCTTCTCAC TTTCATGCTT GCTGGACATG TTGTTGGCTC TTGCTGGTAT CTTTTTGGTC TGCAGAGAGT TAATCAATGC CTTCGAAATG CTTGCGGTAA TTTTGAGCGT GAATGTCATG ATCTTATAGA TTGTGGTAAT GGAATTAGCA CTGTGTTAGT ACGAGCTACC TGGAGAGATA ATGCGAGTGC CAATGCTTGT TTCCAAGAAG ATGGTTTTCC TTATGGAATC TATTTAAAAG CAGTCAATCT AACCAATCAT TCTAGTCTCT TCACAAGATA CAGTTACTCT CTCTTCTGGG GCTTCCAGCA AATCAGCACT CTTGCTGGAA ACCAAGTCCC AAGCTACTTT CTAGGGGAGG TCTTCTTTAC TATGGGTATC ATTGGACTAG GGCTTTTGCT TTTTGCGCTT CTTATTGGTA ATATGCAAAA TTTCCTTCAA GCTCTTGGTA AAAGGAATTT GGAAATGACG CTAAGACGGC GTGATGTGGA ACAATGGATG AGCCATAGAC GGTTGCCAGA TGGTATAAGA AAGAGGGTGC GAGAGGCTGA GCGGTTCAAC TGGGCTGCTA CTAGAGGCGT TAACGAAGAA TTGCTCTTTG AAAATATGCC TGATGATCTC CAAAGAGATA TAAGACGACA CCTCTTTAAA TTTCTCAAGA AGGTGAGAAT ATTTTCGTTG ATGGATGAAC CAATCTTAGA TGCAATCCGT GAGAGGCTGA AACAGAGGAC ATATATAGGG AGTAGCACAG TGTTGCACCG CGGAGGTCTA GTTGAGAAAA TGGTATTCAT AGTGAGAGGT GAGATGGAGA GCATTGGAGA AGACGGTTCT GTTCTTCCTT TATATGAAGG AGACGTTTGT GGTGAAGAAC TCCTCACTTG GTGCCTCGAA CGCTCTTCTG TAAACCCCGA TGGGACGAGG ATAAGGATGC CATCAAAGGG ATTGCTTAGC AACAGAAATG TTAGGTGTGT GACAAATGTG GAGGCATTTT CGCTGAGTGT GGCAGATCTT GAAGACGTAA CAAGCTTGTT CTCGAGATTC TTGAGGAGTC ATAGAGTCCA AGGAGCCATA AGGTACGACT CTCCATATTG GAGGCTACAA GCTGCTAGGC AGATTCAAGT GGCGTGGAGA TATCGTAGGA GACGGCTTCA GAGATTATGT ACTCCTCAGT CTAGTTACAG CCTTTAGTTT GTATTCCTCA TTTTTGAT |
| Length | 2348 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7119743.. 7119820 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G17700.1 |
| Description | cyclic nucleotide-binding transporter 1 |
| TAIR curator summary | cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. |
| Alias | [ATCNGC20][CNBT1][CNGC20][CYCLIC NUCLEOTIDE-GATED CHANNEL 20][cyclic nucleotide-binding transporter 1][cyclic nucleotide gated channel 20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg494036 | Vesicle transport v-SNARE family protein |
| 14.3875 |
Ahg478044 | SMAD/FHA domain-containing protein |
| 18.3576 |
Ahg924051 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 19.3649 |
Ahg486026 | Hs1pro-1 protein |
| 19.4936 |
Ahg477198 | Transmembrane amino acid transporter family protein |
| 22.1359 |
Ahg320032 | Cysteine/Histidine-rich C1 domain family protein |
| 23.0651 |
Ahg489999 | phospholipase D gamma 1 |
| 24.3926 |
Ahg484186 | protein kinase 2B |
| 27.3861 |
Ahg951082 | BAH domain ;TFIIS helical bundle-like domain |
| 29.4958 |
Ahg480073 | receptor like protein 41 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|