| Annotation |
|---|
| Description | jgi|Araly1|486028|fgenesh2_kg.5__2020__AT3G55850.2 |
| Sequence |
TGTGGTGAGC ACAAAGCGAA CTATTCTTTC GCCTTTTACT AAAGAATACC GTGTGCTCTC CACGCTAAGT GGCATACGCC TATTTTTGGA GGGATCTCAC CTAACCGTGA GACCCAACAT CTGCCCTAGT CTGAAGTTAT TTGAGAGCAT AATCATAATT TTAAATCGAC TGGTAAGTTT GGTATTGTAT TTAGTTTCCG GTTAGGATCG GTTTAGATGA ACCTCTTCAT CGTCGTTTCC GCCGCCGTCT TTCTCCTTAT CTCCGTCGCG TATCTTCCTT CGCTCAACGA CTTATATTGG TCAACTCTCA AGTCTCTCAC ACCACCGGTT GGTATCGTGG CGGATTTGTT AGTGAGGAAT GGAACAATCT TCACCAGTGA TAGCTCTTTG CCATTTGCAG ATTCCATGGC GATTCGTAAT GGCAGGATTC TTAAAGTTGG AAGCTTTGCC ACTCTCAAGG GTTTTATAGG AGATGGAACT ATGGAGGTGA ATCTGGAGGG GAAGATTGTA GTGCCTGGAC TTATTGATTC ACATGTTCAT TTGATATCTG GGGGATTACA GATGGCCCAA GTTGGACTTC GTGGAGTGAG TCAAAAAGAT GAGTTTTGTA AAATGGTGAA GGACGCAGTG CAGAATGCAA AAGAAGGCTC ATGGATTTTG GGTGGTGGCT GGAACAATGA TTTCTGGGGA GGAGAATTGC CCTCTGCATC ATGGATTGAT GAAATCTCCC CTCATAATCC TGTTTGGTTG ATTAGGATGG ATGGTCATAT GGCATTGGCA AATTCCCTTG CGCTTAGGAT TGCTGGTGTT ACAAGTTTAA CGGAAGATCC AGTTGGTGGA ACGATAATGA GGATGCCTAG TGGCGAGCCG ACAGGTCTTT TGATCGATGC TGCTATGGAG CTTGTCACTC CCTGGGTTAA AGAAATCTCA GTGGATGAAC GTAGGGAAGC ACTATTTAGA GCTAGCAAAT ATGCTTTAAC TAGAGGCGTG ACAACTGTTA TTGATCTTGG AAGATACTTT CCTGGCACCA CAGATGAGCT CTCCTGGAAA GACTTTCAAG ATGTCTATCT ATATGCTGAT TCCTCGAAGA AGATGATGAT ACGGACTTGC TTGTTTTTTC CCATCACAAC ATGGTCACGT TTATCGGATC TTAAGCTTCA GAAGGGATCT GTACTGAGTG AATGGTTGTA TCTCGGTGGC GTGAAAGCAT TTATTGATGG CTCTCTAGGT TCCAGCAGTG CACTTTTTTA CGAGGAATAT ATTGATTCAC CTGATAATTA TGGGTTAGAA GTGATGGATC CTGAGAAACT TTCCAACTTC ACAATGGCAG CAGACAAATC AGGGCTTCAG GTTGCTATAC ATGCTATAGG CGACAAAGCA AATGACATGA TCCTTGACAT GTACGAATCT GTTGCTGCAG CCAATGGAGA CCGGGATAGA AGATTTAGGA TAGAGCATGC CCAACATTTG GCACCAGGAT CAGCCAACCG GTTTGGTCAA CTTCATATTG TAGCTTCAGT TCAGCCAGAT CATTTGCTTG ATGATGCTGA TTCTGTTGCT AGGAAGATCG GTTCTGAGAG AGCCGAAAAG GAGTCTTATC TATTCCAATC TCTCTTAAAC GGCAATGCAC TCTTGGCACT TGGTTCAGAC TGGCCTGTTG CAGACATTAA CCCGTTGCAT AGTATCAGAA CCGCGGTTAA ACGAATACCT CCCAAGTGGG ATCACGCTTG GATTCCATCT GAACGCATCT CTTTTACCGA TGCGCTGATT GCGCAGACGA TATCAGCGGC ACGAGGAGCG TTTCTGGATC ATCACTTGGG GTCTTTATCT CCAGGAAAAC TCGCAGATTT TGTCATACTG TCAACAAATT CTTGGGATGA GTTCTCAAAA GACGTTTCTG CTTCAGTTTT GGCAACCTAT GTAGGAGGAA AGCAATTGTA TCCATGAATC ATATGATGGA ATGGAGTATT TAATTAAGAA ACAAACTTTA TACACTAGAA TTATCTGATT ATTTATTTGT TTGTCTATGC GTTATCACTT ATCAATGTAC ATATGTATGA CATCTGGCTT ATCAA |
| Length | 2075 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16705504.. 16716352 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G55850.2 |
| Description | Amidohydrolase family |
| TAIR curator summary | Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids. |
| Alias | [LAF3][LAF3 ISF1][LAF3 ISF2][LONG AFTER FAR-RED 3][LONG AFTER FAR-RED 3 ISOFORM 1][LAF3 ISOFORM 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 25.3969 |
Ahg481360 | early nodulin-like protein 14 |
| 31.305 |
Ahg488576 | |
| 37.3898 |
Ahg494222 | Pectin lyase-like superfamily protein |
| 41.3521 |
Ahg472057 | ATP binding microtubule motor family protein |
| 51.8073 |
Ahg918929 | cellulose synthase-like D5 |
| 52.3163 |
Ahg921244 | Myosin heavy chain-related protein |
| 57.576 |
Ahg496158 | TARGET OF MONOPTEROS 6 |
| 57.9655 |
Ahg358455 | |
| 58.5662 |
Ahg912808 | Protein of unknown function, DUF642 |
| 58.6856 |
Ahg887810 | Transmembrane proteins 14C |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|