Detail



ID : Ahg921244

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921244|scaffold_102525.1
Sequence
TCTCGAACTC CGATCTCGAG ATGCAGAAAT TAGGGTTTCC GGCGATGAAG AGCTTGGATC AACTCCGATC GTTTTCTGGA TCGGCGAAGA CGTACTCCTT CTCCACTCGT CCGCCTCAGG ATTCCGTCTC CTCCGGAAGT TTCTCGAATT TGAAACTCAC TGCAGAGAAA CTGGTGAAGG ATCAGGCCGC TATGAGAACA GATCTAGAAC TGGCGAATTG TAAGCTGAAA AAGTCACTGG AGCATGTCTA TGCCTTAGAG GATAAACTTC AAAACGCTTT TAATGAGAAT GCTAAGCTCA GAGTTAGGCA AAAGGAAGAT GAGAAGCTTT GGAGAGGATT GGAATCTAAG TTCTCTTCGA CAAAGACTCT GTGTGATCAA CTTACTGAGA CTCTGCAGCA TTTAGCTTCT CAAGTTCAGG ATGCTGAGAA GGATAAAGTT TTTTTTGAGA CCAAATTCAG TACTAGTTCA GAAGCAATAG ACTCTTTAAA CCAGCAAATG CGAGACATGT CTTTAAGATT AGTTACTGCT AAAGAAGAAA TCACAAGCAG AGATAAGGAA TTGGAGGAGC TCAAACTCGA GAAACAACAG AAGGAAATGT TCTATCAAAC TGAACGGTGC GGAACTGCCA GTCTCATTGA GAAGAAAGAT GCTGTGATAA CAAAGTTAGA AACAACTGCA GCCGAAAGAA AACTCAACAT TGAAAACTTG AACTCCCAAC TGGAAAAGCT ACATCTTGAG TTAACAACAA AAGAAGACGA GGTCAAAGAC CTTGTTAGTA TCCAGGAGAA GTTGGAGAAA GAAAAGACGA GTGTTCAGTT GAGTGCAGAT GAACTGTTTG AAAAGCTTGT CAGCTCAGAG CAGGAGGTTA AGAAGCTCGA TGAATTTGTC CACTACTTGG TAGCTGAGTT GACTGAATTG GACAAAAAGA ATCTGACCCT CAAGGGAAAG TTTGATAAAC TAAGTGGCCT ATATGATACC CACTTTATGT TGTCGCGAAA AGACAGAGAT CTTGCATCAG ATCGTGCTCA AAGATCGTTT GATCAACTCC AGGGCGAGTT TTCTAGCATA ACTGCCCAAA AAGAAGCTCT GGAATCAACG AGCAACGAAC TAAGTGAAAA AATAGTTGTG CTCCAGAATG ATAAAGAGTC TTTAATATCT CAACTTTCTG GGGTACGCTG CTCTGCAAGC CAGACCATTG ATAAATTGGA GTCTGAAGCA AAAGAACTGG TTTTAAAGAA TGCTGAAACA GAATCAGTGA TTTCGAAGCT GAAAGAGGAA ATAGAAACTT TATTGGAAAG TGTAAGGACA TCAGCGGATA AGAAGCAAGA ATTGTCATTA AAGCTTTCAT CATTAGAGAT GGAAAGCAAA GAGAAGTACG AGACACTGCA GGCAGATGCA CATAGACATG TTGGGGAACT AGAGACTTTG CAAAAAGAGA GTGAGAGCCA TCAGCTGCAG GCGGATTTGT TGGCAAAAGA GGTGAACCAG CTCCAAACCG TCATAGAGGA GAAAGGAAAT CTTATCCTGC AGTGCAATGA AAACGAGAAG AATTTAAACC AACAAATCAT TAAGGACAAG GAGCTACTGG CAACTGCTGA AACTAAGCTT GCAGAAGCAA AGAAGCAATA TGACCTGATG CTAGAAAATA AACAGTTGGA ATTGTCAAGG CACTTAAAAG AATTATCACA GAGGAATGAC CAGGCAATTA ATGATATCAG GAGGAAGTAT GATGTAGAGA AGCAGGAGAT TATTAATTCT GAAAAGGACA AGGTTGAAAG AATTATCAAG GAGCTGTCCA CTAAATATGA TAAAGAACTC TCAGATTGCA AAGAAGAATC AAAGAGGCAA CTGCTGACTA GTCAAGAGGA ACATTCTTCT CTGATTCTTA GTATTCGGGA GGAGCATGAG AGTAAGGAGC TCAATCTCAA AGCCAAGTAT GACCAGGAAC TGAGACAAAA TCAGATTCAG GCTGAAAATG AACTAAAAGA GGTAATCACA GATATAACTT CATATTTCAG ACAAATGCAA GAGTATAGAG CCTCTGGTAT TGAAATGGTT TGTATATTTA TCCAGAGGAT AACGGCTTTG AAGAGTGAGC ATGATGTTCA GTTGAAAGCA TTCAAATGTC AGTATGAAGA TGATTGCAAG AAGCTGCAAG AAGAATTAGA TCTTCAAAGG AAAAAAGAAG AGAGGCAAAG AGCTTTGGTG CAGTTACAGT GGAAGGTGAT GAGTGACAAT CCACCTGAAG AGCAAGAAGT TAACTCAAAC AAGGACTCTC CTTTTGTAAA GACAAAAGTA ACATCTGTGT CAAATATATT GAAGAAAGCT AGAAATGTAA ACACAGGAAG CGTAATGAGC ATTCCAAATC CAAAGCATCA TAGCAAGGAA CCTCATCGTG AGTATGACGT TGAAACGAAT AATGGGAGGA TACCTAAACG GAGAAAAACA AGAAATACGA CAATGTTTCA GGAGCTACAA AGACGCAGTA CTAGGTTGAC ACCCAAATTG ATGACACCCA AAAGCATCGC CAAGGAAACA GCGATGGCCG GTCATCCTCG CTCTGCAAAT ATTGGAGACT TGTTTTCAGA AGGTTCCCTC AACCCATATG CTGATGATCC CTATGCATTT GATTGAAGTC TACCTCACAA AGTCAGT 
Length2657
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9322322.. 9327383
Download Sequence
A.thaliana
AGI-codeAT1G22275.1
DescriptionMyosin heavy chain-related protein
TAIR curator summaryOne of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.
Alias[ZYP1][ZYP1b]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg335550 Myosin heavy chain-related protein
19.799 Ahg495141 Nodulin MtN3 family protein
25.1794 Ahg477561
28.2843 Ahg486918
42 Ahg912172
48.4355 Ahg484930 exostosin family protein
52.3163 Ahg486028 Amidohydrolase family
62.1369 Ahg480018
65.0538 Ahg482616 growth-regulating factor 3
72.9383 Ahg485479 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression