Detail



ID : Ahg486460

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486460|fgenesh2_kg.5__2452__AT3G59950.1
Sequence
AATCATCCAT ATTCGAAGCT TAAGATAATT ACGTAAAATA GAGAAGAGAG AGAGAACACG AAACTTTTTA TTTCGTAAGG TTACACGAAA TCGATCTTCC GCAATTCAAA CTTCGTCTCC GTTAATTCGC ACTCTCGTTC TCGTCTTCGT CGCCGGAGGT CGTATCAAGT CAGCCTCGAC GATCCGATTT GTATTTTCAG ACAAAGGAAG GAAGATTCTG AGTATTAGTT TTCTTCTATG AGACAGACAT GTTGCATTTG GTACTTAATG ACTAGGTAAT GAAGGCTATA TGTGATAGAT TTGTTCCTTC AAAATGTTCT TCATCATGCA CAAGTGAAAA GCGTGATATA TCCCAGACAT CTCTAGTTTC AGATTCACCG TCTAGTGACA ACAAGTCAAA CTTGACGTTA TGCTCGGATG TGGTTGCGTC TTCCTCCCCA GTTTCTCAAC CGTGTAGGGA AGCTTCAACT TCCGAGCATA AGCCAGTTTG CACCACACAT AATAGTTGGA CAGTTATTTT AAAAACAGCT TCTATGGCTA GTGGGGCAAT TAGGAGATTT CAAGACCGTG TATTAGGGCC GAGTAGGACG GGTATTTCCA GCAGTACAAG TGAGATATGG CTCCTGGGTG TCTGTTATAA AATCTCAGAG GCTGAATCCT CCGAAGAAGC AGATGCTGGC CGTGTATTGG CTGCATTCAG ACAAGATTTT TCATCCTTAA TACTAATGAC ATATCGTAGA GGTTTTGAGC CTATTGGAGA CACAACTTAT ACTAGTGATG TAAACTGGGG TTGCATGCTT CGAAGTGGCC AGATGCTCTT TGCACAGGCG TTGCTATTCC AAAGGCTGGG AAGGTCTTGG AGGAAAAAGG ATTCCGAGCC TGCGAATGAG AAATACTTAG AGATCTTAGA ACTTTTTGGT GATACTGAGG CTTCAGCATT CTCGATTCAC AATCTTATAC TAGCTGGAGA ATCCTATGGC CTGGCTGCTG GGTCATGGGT AGGACCATAT GCTGTTTGTC GATCATGGGA ATCATTAGCT CGGAAGAACA AAGAAGAAAC TGATGTTAAA CACAAGTCGT TTTCCATGGC TGTTCATATC GTTTCTGGCA GTGAAGATGG AGAGAGAGGT GGAGCTCCAA TTCTCTGTAT TGAAGATGTC ACCAAAACTT GTTTGGAATT TTCAGAAGGG GAAACTGAGT GGCCGCCAAT TCTTCTCTTG GTCCCTCTGG TTCTCGGGCT TGACAAAGTG AACCCCAGGT ACATTCCGTC TCTGATAGCC ACTTTCACAT TCCCTCAAAG CCTCGGCATT TTGGGCGGCA AACCAGGTGC ATCAACTTAC ATAGTTGGAG TTCAAGAAGA CAAAGGTTTC TACCTTGATC CGCATGATGT TCAACAGGTA GTGACAGTCA AGAAAGAAAA TCAAGATGTT GACACATCGT CTTACCATTG CAATACCCTC CGTTATGTTC CGCTTGAGTC ACTCGACCCG TCACTAGCTC TTGGATTCTA TTGCCAGGAC AAAGATGATT TCGATGATTT CTGTATCCGA GCAACGAAGC TAGCGGGGGA CTCTAATGGC GCTCCTCTCT TTACTGTGAC TCAATCTCAC AGAACAAATG ACTGTGGAAT TGCAGAAACC AGCAGCAGCA CAGTGATATC TACAGAGATC TCTGGTGAGG AACATGAAGA TGACTGGCAA TTACTTTGAA CTCTTTTACT AGCCATTCTA TTTCATTGTG TGACTTTGTT CAATTGTCAA AATACCATTC TTTTTACACC GA 
Length1782
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18539498.. 18542985
Download Sequence
A.thaliana
AGI-codeAT3G59950.1
DescriptionPeptidase family C54 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg927234 transferases, transferring glycosyl groups
6.7082 Ahg476122 serine/threonine protein phosphatase 2A
12.1655 Ahg491441 RING/FYVE/PHD zinc finger superfamily protein
13.8564 Ahg950867 U5 small nuclear ribonucleoprotein helicase
18.3848 Ahg949110 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
23.4947 Ahg313324 Mediator complex, subunit Med10
23.5372 Ahg492411
25.9037 Ahg944202 Quinone reductase family protein
32.311 Ahg336969 Protein kinase superfamily protein
32.3728 Ahg316232 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression