| Annotation |
|---|
| Description | jgi|Araly1|949110|scaffold_800997.1 |
| Sequence |
TTTTGGTAAA GCTCTCTCAT GGAATGGCAG ATCTTGTGAG TTATGGTAAT GTCGTCCGAG ACATCGAGCA GGCTCTAATT GCATTGAAGA AAGGTGCTCA ACTGTTGAAA TATGGTCGGA AAGGAAAGCC TAAGTTTTGT CCATTTAGAC TCTCCAATGA TGAGACATCT TTGATCTGGA TTTCAAATGG TGGAGAAAAA CGATTGAAGT TAGCAACTGT ATCTAAGATT GTTCCAGGAC AGCGAACTGC TGTTTTCCAA CGTTACCTTC GCCCGGATAA GGATTATTTA TCTTTTTCCC TAATATACTC CAACAGGAAG CGGACTCTTG ATTTGATTTG CAAGGACAAA GTTGAGGCAG AGGTGTGGAT AGCTGGTCTC AAAGCTTTGA TATCTGGTCA GGCTGGCCGC TCTAAAATTG ACGGCTGGAG TGATGGAGGC CTTTCTATTG CTGACAGCAG AGACTTGACA TTAAGCAGTC CTACCAACAG CTCAGTTTGT GCTTCTCGAG ATTATAACAT TGCTGAGACT CCCTACAATT CAACCGCTTT TCCCCGGACT TCTAGAACTG AGAATTCTGT CAGTTCTGAA CGGTCACATG TGGCATCAGA TAGCCCAAAT ATGTTAGTAC GAGGACCTGG ATCAGACGTG TTCCGGGTTA GTGTTTCTAG TGTTCAAAGC AGCTCAAGTC ATGGTTCTGC TCCAGATGAT TGTGATGCTC TAGGTGATGT TTATATATGG GGTGAAGTGC TATGTGATAA TGTTACCAAA TTCGGGGCTG ATAAGAATGC TAGTTGTGTT GGTTCAAGGT CTGATGTTCT GATTCCAAAG CCGTTAGAAT CCAATGTAGT TTTGGATGTC CATCACATAG CATGTGGTGT TAGGCATGCT GCTCTAGTCT CTAGGCAAGG TGAGGTTTTT ACATGGGGTG AAGCATCCGG AGGACGTCTT GGCCATGGAA TGGGAAAAGA TGTTACTGGG CCTCAGCTTA TTGAGTCTCT AGCTGCTACT AGTGTTGACT TTGTTGCCTG TGGTGAGTTC CATACATGCG CTGTCACAAT GACAGGAGAG ATTTACACAT GGGGTGATGG AACACACAAT GCAGGACTTC TCGGCCATGG TACCGATGCG AGTCACTGGA TACCTAAGAG AATATCAGGT CCTCTTGAAG GTCTTCAAAT TGCTTCCGTA TCCTGTGGAC CATGGCACAC CGCTTTGATA ACATCAACTG GACAGCTTTT TACATTTGGA GATGGGACTT TTGGTGTTTT AGGGCATGGT GACAAGGAAA CTGTATTTTA TCCAAGAGAA GTTAAATCTT TATCTGGTTT GCGGACTATT GCTGTTGCAT GTGGTGTATG GCATGCTGCT GCAATAGTAG AAGTCATTGT CACTCAGTCA AGTTCAAGTA TTTCATCAGG AAAGCTGTTC ACATGGGGTG ATGGTGACAA AAGCCGTCTT GGTCATGGAG ATAAAGAGTC TCGGCTTAAA CCCACATGTG TATCAGCTCT AATTGACCAT ACTTTTCACA GAGTTGCATG TGGACATAGT TTAACAGTTG GTTTGACCAC ATCGGGAAAA GTTTACACGA TGGGTAGTAC AGTTTATGGT CAACTAGGGA ATCCCAATGC TGATGGGAAG CTTCCTTGCT TAGTAGAGGA TAAACTAACT AAGGATTGTG TTGAAGAAAT AGCATGCGGA GCTTATCATG TAGCAGTTTT AACATCTCGA AATGAAGTAT TTACATGGGG GAAGGGTGCC AATGGGAGAT TAGGTCATGG AGATATTGAG GACCGTAAGG CACCAACTCT TGTCGATACT TTGAAAGAGA GACATGTAAA AAATATTGCC TGTGGTTCAA ACTTCACAGC AGCAATATGT CTTCATAAAT GGGTTTCTGG CACTGAGCAA TCTCAATGTT CAGCTTGTAG ACAGGCTTTC GGATTCACAC GAAAAAGGCA CAATTGTTAC AACTGTGGAC TTGTCCACTG CCATTCATGC AGTTCCAAGA AATCACTAAA AGCTGCTTTG GCCCCTAATC CAGGCAAGCC TTATCGTGTC TGCGATTCAT GTTACTCTAA ACTAAGTAAA GTGTCAGAAG CTAGTACTGA TAGCAGGAAG AATATTATGC CACGACTTTC CGGTGAGAAC AAGGACAGAT TGGATAAAGC CGAGATAAGA TTGGCTAAAT CAGGAATACC ATCAAATATA GATTTGATCA GGCAGCTGGA TAGCAGGGCA GCTAGACAAG GAAAGAAGGC GGATACATTC TCTCTTGTCC GCACTTCCCA AACACCTCTA ACACAACTTA GAGATGCTCT GACTAATGTG GCTGACTTAC GGCGTGGGCC ACCAAAACCA GCAGTAACTC CATCTGGAGC AAGCTCCAGA TCTGTGTCAC CTTTCTCAAG GAGGTCTAGT CCTCCTCGTT CAGTCACTCC CATTCCTTTG ACGGCTGGTC TTGGTTTTTC AACAAGTATA GCTGAGAGTT TGAAGAAGAC AAATGAACTT CTGAATCAGG AAGTAGTCAA ATTGCGCGCC CAGGCCGAGA GTCTGAGGCA CAGATGCGAG GTCCAAGAAT TCGAAGTTCA GAAATCTGTG AAAAAAGTAC AAGAAGCAAT GAACCTGGCA GCAGAGGAAT CTGCCAAATC AGAAGCCGCA AAAGAAGTTA TAAAATCTCT GACAGCTCAG GTCAAGGATA TAGCTGCGCT GCTACCACCG GGTGCTTACG AAGCTGAGAC CACACGGACA GCTAATTTAT TGAACGGGTT TGAGCAAAAC GGATTTCACT TCGCTAATGC AAATGGACAG CGTCAATCAC GATCTGATTC AATGAGTGAC ACCTCACTTG CTTCGCCTAT GGCTATGCCC GCTCGTTCAA TGAATGGACT CTGGCGAAAT TCCCAGTCGC CAAGAAACAC AGATGCAAGC ATGGGCGAAC TTCTAAGTGA GGGGGTCCGA ATCAGTAATG GTTTCTCAGA AGATGGTGAC AACCGCCGAA ACTCAAGAAG CTCAGCAGCC TCAGCTTCAA ATGCTTCTCA AGTGGAGGCG GAGTGGATCG AACAGTATGA ACCTGGTGTT TATATAACAC TATTGGCCCT AGGCGATGGA ACTAGAGATC TCAAACGTGT GCGCTTTAGC CGGCGAAGAT TCAGGGAGCA ACAGGCAGAA GCATGGTGGT CAGAGAATCG CGAAAGAGTG TACGAGAAGT ACAACATTCG TGGTACCGAT AGATCAAGCG TGGCAACATC ACCTATATCA CAATCTCAAT TCCAGACATG AACCAAAAAC AACGA |
| Length | 3295 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 6950605.. 6954991 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42140.1 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.8062 |
Ahg316232 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
| 17.7482 |
Ahg481962 | Kinase interacting (KIP1-like) family protein |
| 18.3848 |
Ahg486460 | Peptidase family C54 protein |
| 23.3238 |
Ahg479191 | ubiquitin protein ligase 6 |
| 25.807 |
Ahg473775 | VIRE2-interacting protein 1 |
| 28.1425 |
Ahg471744 | Protein of unknown function (DUF1644) |
| 30.348 |
Ahg496651 | Octicosapeptide/Phox/Bem1p family protein |
| 30.8869 |
Ahg933994 | IQ-domain 9 |
| 35.2704 |
Ahg478636 | ALA-interacting subunit 1 |
| 38.0657 |
Ahg890756 | Pre-mRNA-processing-splicing factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|