Detail



ID : Ahg486765

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486765|fgenesh2_kg.5__2757__AT3G62670.1
Sequence
ATGTCAGTTT CAGCAAACCT ACTCGATGAG AACTCTCGCG ACTTGCGAAA AGAAGTACCT TGTGATGATG AAATTGGATC TCCAATCAAC GACGACGATG AAGAGTTCCC GACTACAAGT ATTAGAGTTC TTTTGGTAGA TGCAGATTCC AATTCTTTAC TTCCCATGAA GAATCTCATG ATACAGTACT CCTATCAAGT AACGAAATAC GAAGACGGAG AAGAGGCCAT GGCTTTCTTG ATGAAGAATA AGCAAGAAAT CGATCTAGTG ATTTGGGATT TCCATATGCC CGATATCAAT GGACTCGACG CTCTCAATAC CATTGGTAAA GAGATGGATT TACCCTTAGT AATCATGTCT CATGATCACA AAAAGGAAAC GGTGATGGAA TCGATTAAGT ACGGCGCGTG TGACTTTCTT GTGAAGCCGG TGAGCAAAGA GGTCATTGCA GTTCTATGGC GACATGTTTA TCGCAAAAGG ATGTCAAAAT CTGGTTTAGA TAAACCGGGT GAATCAGGTA CGGTTGAATC AGATCCGGAC GAATACGACG ATTTAGGGCA AGACAATCTC TATCAGAGCA ACGAAGAAGG CTCCAAAAAC TCTTCCGATC AAAAAGGAGA GAAGCCTGCG ACCAAGAAAC CGCGGATGCA ATGGACTACT GAACTTCACC ACAAATTTGA AGTAGCCGTC GAAAAACTCG GCAGCCTTGA GAAGGCTTTT CCGAAGACGA TTCTCAAATA TATGCAAGAA GAAATGAATG TCCAGGGGCT CACTAGAAAC AACGTAGCCA GTCATCTTCA GAAGTACCGT CAAAATTCAA AACAAAAGAC CCGCACTCAC CAGGAGCCCC AAGAAGATTT TTTCTGGCGT AATGCTGGGC CAGATGCCAC TCTCGCAGCC TCTAATCCGC CCCTAAGCTC GAACCTCAAT ATCCATGCTA CCGCATCGTA TTTGATGAAC AATCAAGCTG CGCCTAGAGC ATCATATTTC ATGAACAATC AAGCCGCATC CCCAATCCCG TATCCATCAA ACAGTTGCCT GCCAATGAAC AACAACAACT ACTTCATGAC CAAACCTTTC ACTTATATTG ACCAATTCCA GCAGCAGCAA CAACAGTACC ATTCGTCTCT AAATTTACCC TCCATGCTAA CCAAGCAAGA ACCTAGACAC GTGCCATTAT CAGCCATGGA AAATTTCGAT ACGCCCATGA TCTATAATTC AAGTTTCCAT TTCGATCACG ACGAGTATTT CCCACCTGAA GGATTCAACA ATTTCGATCA GATTGGTCAG AATTGA 
Length1296
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19729120.. 19730917
Download Sequence
A.thaliana
AGI-codeAT3G62670.1
Descriptionresponse regulator 20
TAIR curator summarymember of Response Regulator: B- Type
Alias[ARR20][MEE41][RR20][response regulator 20][maternal effect embryo arrest 41]
Gene coexpression
MR
MR Locus Description
15.8745 Ahg947778
17.9444 Ahg889767 F-box family protein
19.105 Ahg334832 HCO3- transporter family
26.0384 Ahg947246
38.2099 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
39.6232 Ahg942130 Leucine-rich repeat (LRR) family protein
41.9285 Ahg336658
50.5173 Ahg483262 Protein of unknown function, DUF642
51.6236 Ahg329423 MATE efflux family protein
54.3323 Ahg890667 Plant invertase/pectin methylesterase inhibitor superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression