Detail



ID : Ahg486975

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486975|fgenesh2_kg.6__109__AT5G01050.1
Sequence
ATGCCTCGAC TTCATCATTA TCTCCCAATT CAAACCTTCG TCGTTCTTCT TCTCTTCTCT TCCATTGCCT CAGCAGCTAT TGTCGAACAT GTCCTCCACG TCAAAGACGT CATGGTGAAA CCGTTATGCA AGGAGCAAAT GATACCAACA GTTAACGGAA GTTTTCCGGG TCCAACGATA AACGTTAGAG AAGGCGACAC TCTTGTGGTT CATGTCATTA ACAACTCAAC TTACAACGTA ACCATCCATT GGCATGGAGT TTTTCAGTTG AAGAGCGTAT GGATGGACGG TGCGAATATG ATAACTCAAT GTCCGATTCA ACCAAGTAAC AACTTCACAT ATCAATTCGA TATCACCGGA CAAGAAGGTA CATTGTTATG GCACGCACAC GTCGTTAATC TACGTGCCAC TCTTCATGGG GCTCTAGTCA TCCGTCCTCG ATCCGGCCGT CCTTACCCTT TTCCTAAACC CTACAAGGAA GTTCCTATCA TTTTTCAACA ATGGTGGGAC ACAGATGTTA GACTTCTCGA ATTACGGCCA GCTCCGGTTT CTGATGCTTA CCTCATCAAT GGCCTCGCCG GAGATTCATA TCCTTGCTCT CAGAATAGAA TGTTTAACCT CAAGGTTGTA CACGGAAAAA CATACTTGCT AAGGATTATA AACGCAGCAC TCAACACTCA CCTCTTCTTC AAAATAGCCA ATCACAACGT CACAGTTGTC GCTGTAGATG CTGTCTACAC GACGCCGTAC CTCACCGATG TGATGATCTT AACGCCGGGA CAAACTGTTG ACGCACTTCT CACCGCCGAC CAGCCCATTG GAATGTACTA CATGGCCACC ATCCCTTACT TTAGTGCCAT CGGGATACCA GCATCCCCCG ACATCAAACC CACCAGAGGA TTAATCGTCT ACGAGGGTGC CACGTCATCA TCATCGCCAG TGAAGCCGTT GATGCCTGCT ACGACTGACA TAGCCACCTC TCATAGGTTC TCCTCGAACA TCACTAGCCT CGTGGGTGGA CCACACTGGA AGCCAGTGCC TCGTCACGTG GACGAGAAGA TGTTCATAAC CATGGGGCTT GGCTTAGACC CATGTCCTTC GGGTACCAAG TGTATTGGAC CGTTGGGTCA AAGGTATGCT GGATCTCTCA ACAACCGCAC TTTTATGATT CCGGAGAGAA TCTCTATGCA AGAGGCTTAT TTTTACAACA TTAGTGGAGT CTACACCGAA GATTTTCCCG ACCAACCACC GGTTAAATTT GATTACACAA AATTCCAACA GCGTACGAAT TCTGACATGA AGATGATGTT TCCGGAAAGA AAGACTAGCG TCAAAACAAT TAGATTTAAT TCAACAGTCG AGATTGTTTT GCAAAACACG GCTATTCTCT CCCCGGAGAG CCACCCCATG CACCTTCACG GCTTCAACTT CTATGTTTTG GGTTATGGAT TTGGTAACTA TGATCCTATT CGTGATGCAA GAAAGCTAAA TCTATTTAAC CCACAGATGC ACAATACCGT TGGTGTACCA CCAGGTGGAT GGGTTGTCCT CAGATTTATC GCTAATAATC CTGGTGTATG GCTGTTCCAT TGTCACATGG ATGCACATTT ACCATACGGG ATTATGAATG CTTTCATAGT TCAAAATGGG CCAACTCCGG AAACGAGCTT GCCATCTCCA CCGTCGAATC TTCCGCAATG CACTCGTGAT CCTACGATCT ATGACTCTCG GACGACTAAC ACTGATTTGT CTTACTAAAA GCAACTAGGT TCG 
Length1773
Protein Sequence
Protein Residue
Map Locationscaffold_6: 432433.. 441088
Download Sequence
A.thaliana
AGI-codeAT5G01040.1
Descriptionlaccase 8
TAIR curator summaryputative laccase, knockout mutant showed early flowering
Alias[LAC8][laccase 8]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg912947 Polyketide cyclase/dehydrase and lipid transport superfamily protein
4 Ahg947612
9.16515 Ahg316907
12.7279 Ahg470978 plant glycogenin-like starch initiation protein 5
12.8452 Ahg892274 SGNH hydrolase-type esterase superfamily protein
13.8564 Ahg916296
17.2337 Ahg484253 Galactose oxidase/kelch repeat superfamily protein
18.6548 Ahg904884 RNA-binding protein
18.9737 Ahg900078
21.3307 Ahg338146 KNOX/ELK homeobox transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression