Detail



ID : Ahg487170

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487170|fgenesh2_kg.6__304__AT5G03910.1
Sequence
AATTATCACC AAATTAGAAA TAGAAGTTGA TTCGTTTTGG TTCGATTCAA TTTGTTTTGG AGAGAAATGT CATTTCTCCT CCGCGTAACA CCGCCGCCGT GTCTTCTCAT TCCTCCTCCG CCGCTATCTC ACCGCCGGAG CTCATCTCTC TTTCTCAAAC ATCCATTTCA ACCATCTCCG AGACCTCTGA GCTCCGGTAA ACCATCCGCT CTCCGTCTCC GAGCCAATAC AACAGTCAAT TCACTAAAAC CCTTCGAAAA TGTTAAACCC TATCTACAAT CGGAATCTAA AACCATCCTC CTTGGCTGGC TCTGCAGCTG TGTCTCTGTT GTCTCGCTTT CTCAGATTGT TCCAAGACTC GGCTCCTTCA CTTCCAGCCT AAACGCAAAC GCCGCGAGCT TGATGAAGCT CAAAGGCGAA TGTCTCGTTT TGGCGGGTTT GGTTTTAGCT AAGGTTGTTG CTTATTATCT GCAGCAAGCG TTTCTTTGGG AAGCTGCTTT GAATACTGTT TACAAGATTC GTGTTTTCGC GTATCGGAGG GTTTTAGAGA GGGAATTAGA GTTCTTTGAA GGTGGGAATG GGATTTCATC AGGAGACATT GCTTACAGGA TTACTGCTGA AGCTTCTGAA GTTGCTGACA CTATCTATGC TCTTCTCAAC ACAGTTGTGC CCAGTGCTAT CCAGATATTT GTAATGACGG CACATATGAT TGTTGCAAGT CCTGCCTTGA CACTAGTCTC TGCAATGGTG ATTCCATCTG TTGCGCTTCT TACAGCGTAT CTTGGTGATC GGCTTCGTAA GATATCTAGA AAGGCACAGA TTGCTTCTGC TCAACTTTCT ACTTACTTGA ATGAGGTTCT TCCTGCAATT TTGTTTGTGA AGGCTAATAA CGCAGAGATC TCTGAGAGTG TGAGGTTTCA GAGGTTTGCT CGTGCTGCCC TAGATGAAAA TTTTAAGAAG AAGAAAATGA AGTCACTCAT CCCTCAGATT GTTCAAGTTA TGTATCTCGG ATCATTGTCG ATATTTTGTG TTGGAGCAGT GATACTTGCA GGCTCTTCTT TAAGCTCTAG TGCAATTGTG TCCTTCGTAG CATCTTTAGC TTTCTTGATT GATCCTGTCC AGGATTTGGG AAAAGCTTAT AATGAATTGA AGCAAGGAGA GCCAGCGATA GAACGTTTGT TTGATTTGAC CTCTTTGGAA TCTAAGGTGA TCGAGAGACC TGAGGCCATT CAATTGGAAA AAGTTGCTGG CGAAGTTGAG TTATGCGATA TATCATTTAA ATATGACGAG AATATGCTTC CTGTTTTGGA TGGGTTAAAT CTTCATATTA AAGCAGGAGA GACTGTAGCT CTTGTTGGGC CATCTGGAGG AGGAAAGACA ACACTGATCA AATTGCTCCT CCGCCTTTAT GAACCTTCAT CTGGCTCTAT CTTCATTGAC AAAAATGACA TCAAGGATAT CAAATTGGAA AGTTTGAGGA AGCATGTTGG TCTGGTTTCA CAGGACACAA CTCTGTTTTC AGGGACAATT GCTGACAACA TTGGGTACAG AGATCTCACG ACAGGAATTG ACATGAAAAG AGTTGAGCTT GCTGCAAAAA CTGCAAATGC TGATGAATTT ATCAGAAACT TACCAGAGGG ATACAACACA GGAGTTGGTC CCAGGGGTTC AAGCTTAAGC GGAGGCCAGA AGCAAAGACT AGCTATCGCA AGAGCGCTCT ATCAGAATTC ATCGGTACTG ATTTTGGATG AAGCAACATC AGCATTGGAT AGTTTGTCGG AGTTGCTAGT CAGAGAAGCT CTTGAACGTG TAATGCAAGA CCATACGGTA ATTGTGATAG CACATAGACT GGAGACAGTG ATGATGGCGC AGAGAGTGTT CTTGTTAGAG AGGGGAAAGC TAAAGGAATT GAATCGCTCT TCTCTGTTAA GTACTCACAA GGACTCACTA TCATCAGCTG GACTCGTGAT TTAAGAT 
Length1977
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1193005.. 1195859
Download Sequence
A.thaliana
AGI-codeAT5G03910.1
DescriptionABC2 homolog 12
TAIR curator summarymember of ATH subfamily
Alias[ABCB29][ATATH12][ATH12][ATP-binding cassette B29][ARABIDOPSIS THALIANA ABC TRANSPORTER HOMOLOG 12][ABC2 homolog 12]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg343169 endonucleases
9.79796 Ahg486864 FMN-linked oxidoreductases superfamily protein
15.4272 Ahg939248 Acid phosphatase/vanadium-dependent haloperoxidase-related protein
24.1868 Ahg471595 CAAX amino terminal protease family protein
24.2487 Ahg336541 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
24.8193 Ahg484328 Amidase family protein
25.2785 Ahg925447 RNA polymerase subunit alpha
26 Ahg318821
30.5778 Ahg948486 Disease resistance protein (TIR-NBS-LRR class)
31.0805 Ahg491796 atypical CYS HIS rich thioredoxin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression