| Annotation |
|---|
| Description | jgi|Araly1|487478|fgenesh2_kg.6__612__AT5G06680.1 |
| Sequence |
TTCAAAAATC AAATTCAACA AAAAAAAAAA GTTGAAATCG AATCGAAGAA GATAAAAAAA GGCAAAAGCT TACATTGATG GAAGACGACG ATCAGCAGAA GGCTGCAGAT CTAGTACAAG AGCTTGTTCT TCGTCTCGTC TCCCAAAACC CTCAAACCCC TAATCTCGAT CCCAATTCTC CCGCCTTCCT CAAAACCCTT CGTTACGCCT TTCGTATCCT CTCTAGCCGC CTTACTCCCT CCGTCCTCCC TGACGCCACC GCTATCGCTG AGTCTCTCAA ACGCCGTCTC GCTACTCAGG GTAAGTCCTC CGACGCACTC GCTTTTGCCG ATCTCTACAC TAAGTTCGCT TCCAAGACTG GACCAGGCAG TGTCAATAAT AAATGGGCTC TTGTTTATTT GCTTAAAATC GTTTCTGATG ATCGTAAATC GGCTATAAAT GGTCTTGATT CGTCGGTTTT GTTACCTAAT TTGGGGCTTG GTGATGCTGG TAATGTGTTT TCGCGCCGTG GGGAGGCTAA GAAGAAGGAT TGGAGTAATG GGGTTTTGTT GGTTAGTAAA GATCCTGAGA ATTTGCGAGA TATTGCGTTT AGAGAGTATG CGGTTTTGGT TAAGGAAGAG AATGAAGTGA CTGAGGAGGT TCTAGTTAGG GATGTTTTGT ATGCTTCCCA AGGTATTGAT GGGAAATATG TGAAATTTAA CAGCGAAATT GACGGTTATG CGGTGCAGGA GTCTGTTAAG GTGCCTCGAG CTACTAGGAT TATGGTACGT ATGCTCTCTG AGCTTGGCTG GTTGTTTAGA AAGGTTAAGA CTTTTATAAC CGAGAGTATG GATCGGTTTC CAGCTGAGGA AGTGGGAACT GTTGGGCAAG CGTTTTGTGC GGCATTGCAA GATGAGCTCT CTGATTATTA TAAGTTATTG GCTGTGCTTG AAGCACAGGC CATGAATCCT ATTCCTTTGG TTTCTGAATC AGCTAGCTCA AGTAATTACC TTTCTTTGAG GAGGTTGTCG GTATGGTTTG CGGAGCCTAT GGTGAAAATG AGACTGATGG CTGTTTTGGT TGACAAGTGT AAGGTACTGA GAGGTGGGGC GATGGCTGGG GCTATCCATT TGCACGCACA GCATGGTGAT CCGCTTGTTC ATGATTTTAT GATGAATCTG CTCCGATGTG TGTGTTCTCC GCTGTTTGAA ATGGTGAGAA GTTGGGTTCT AGAAGGAGAG TTGGAAGATA CTTTTGGTGA ATTCTTTATC GTTGGTCAGC CTGTTAAAGT CGATTTGCTT TGGAGAGAAG GTTATAAGCT CCACCCAGCG ATGCTTCCGT CTTTTATTTC ACCGAGTCTA GCTCAGAGAA TTCTGAGAAC TGGGAAATCT ATAAACTTTC TTCGTGTTTG CTGTGATGAT CACGGGTGGG CTGATGCAGC TTCAGAAGCA GCAGCTGCAT CTGGGACGAC GACTAGGCGA GGAGGTCTCG GGTATGGTGA AACAGATGCA CTTGAACATC TTGTTACCGA GGCAGCAAAA AGAATCGACA AGCATCTGTT GGATGTTCTA TATAAGAGAT ATAAATTCAA GGAGCATTGT CTTGCCATTA AGCGTTATTT ACTACTTGGT CAAGGTGATT TTGTTCAATA CTTGATGGAT ATTGTAGGAC CTAAGCTTTC TGAGCCAGCC AATAATATTA GTTCATTTGA ACTAGCTGGG TTTCTTGAGG CTGCAATACG AGCATCAAAT GCGCAGTATG ATGACCGTGA CATGCTAGAC AGATTGAGAG TGAAGATGAT GCCTCATGGC AGTGGAGACA GAGGCTGGGA TGTATTCTCA TTGGAATATG AGGCAAGGGT TCCATTAGAT ACCGTGTTTA CTGAGTCTGT TTTGTCCAAA TACCTGAGAG TGTTCAATTT TCTCTGGAAG TTGAAACGGG TAGAGCATGC TCTTATCGGA ATTTGGAAGA CCATGAAACC AAATTGCATC ACTTCGAACT CATTCGTTAA GCTCCAAACT TCGGTGAAGT TGCAATTGCT CTCAGCCCTG AGGCGGTGCC AGGTCCTTTG GAATGAAATG AACCATTTTG TTACTAACTT TCAGTATTAC ATCATGTTTG AAGTATTGGA GGTGTCATGG TCTAATTTCT CAAAAGAGAT GGAAGCTGCT AAAGACTTGG ATGATCTCTT GGCAGCACAT GAGAAGTACC TCAACGCCAT TGTTGGAAAA TCTCTTCTGG GTGAACAGTC ACAGACCATC CGCGAATCAC TTTTCGTCCT GTTTGAGCTT ATATTACGGT TCAGGAGTCA TGCAGATCGT TTGTATGAAG GAATTTACGA GTTGCAAATA AGATCTAAAG AATCAGGACG AGAAAAAAAC AAATCGCTAG AGCCCGGTTC ATGGATCAGT GAGGGTAGGA AGGGCTTAAC ACAGCGTGCG GGAGAATTTC TACAAAGCAT GAGTCAAGAT ATGGACAGTA TTGCAAAGGA ATACACATCT TCACTCGATG GATTCCTATC TCTTTTGCCT CTGCAACAAT CTGTAGATCT CAAGTTTCTC TTCTTCCGGC TTGACTTCAC TGAGTTCTAC AGCCGATTGC ATTCCAAAGG ATAAGAAAGT TGAAAGAGTA TCAGGTTTAG TTGAAAAGCA TATTGCACAA TAGCAAGAGA AGAAGACATG ATCTACGTCT TTCACTAACC GCTGACTGCA GCATGGGCTC CTGAACCAGG GATGCAGAGG TTCTATTCTT AAAATCTAGG TGCGTGGAAG AATCTTTCTT ATTTACGAGA CTGCCTCATA GATTTTGTGT CTTTTGCACA GATTGCTTTT TTTAAATGGC TTGTTTCAAA GTTTAGGATT GGGAAACAGA TTCTTTGTGT TGGTAAATTG GGGAAGGTTT GTGTTTGAGT TTGTGCTATC AGTCTGATGA TCTCCAGCTT TAGTTTTTTT TTTTTTTTAC GTTCCTCCAT GTGGTTCACT GATTTGTATG ATTTGTTTTG TGACTTGGTT GATATAAGAA GGAATCAGTT GCTTCTTCAT |
| Length | 3020 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2427075.. 2430226 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06680.1 |
| Description | spindle pole body component 98 |
| TAIR curator summary | Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. |
| Alias | [ATGCP3][ATSPC98][GCP3][SPC98][ARABIDOPSIS THALIANA GAMMA TUBULIN COMPLEX PROTEIN 3][SPINDLE POLE BODY COMPONENT 98][GAMMA TUBULIN COMPLEX PROTEIN 3][spindle pole body component 98] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.8564 |
Ahg472755 | Agenet domain-containing protein |
| 16.2481 |
Ahg492028 | |
| 21.6333 |
Ahg937723 | Major facilitator superfamily protein |
| 21.7715 |
Ahg476935 | putative protein kinase 1 |
| 30.9193 |
Ahg931278 | RING/U-box superfamily protein |
| 32.1559 |
Ahg910878 | |
| 32.4037 |
Ahg332994 | Flavin-binding monooxygenase family protein |
| 32.6497 |
Ahg486380 | Protein kinase superfamily protein |
| 33.6749 |
Ahg481406 | DNAJ heat shock N-terminal domain-containing protein |
| 36.1248 |
Ahg492613 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|