Detail


ID : Ahg487654

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487654|fgenesh2_kg.6__788__AT5G08190.1
Sequence
TTCTGGTCTT ATGTTTTTTT GCCCTAATCG ACTTCTGCGT AGAGAAACCG AAAAAAGGAG AGAGAAAATC CGCCGATAAG ATATCCGTAC AACCCGACCG ACTTCACGTC TCCGATCTCG CCGTGACTCG GTCTCGAGAT TCTGTTAACT CGCCGTCGTT GATATCCCAC CGTTTCGATC CTCGGTAAAG TCTATCTCAT ACGATGGATC CGATGGATAT AGTTGGAAAA TCAAAGGAAG ATGCTTCGCT TCCTAAAGCT ACCATGACGA AAATTATAAA GGAGATGTTA CCCGCAGAGG TTCGTGTTGC TAGAGATGCT CAAGATCTAT TGATTGAGTG TTGCGTAGAG TTCATAAATC TTATATCCTC GGAGTCTAAC GAAGTATGTA ACAAAGAGGA TAAACGAACA ATCGCCCCTG AGCACGTACT CAAAGCTTTA CAGGTTCTCG GCTTTGGGGA ATACGTCGAA GAAGTCTATG CCGCTTATGA GCAACATAAA TATGAAACCA TGCAAGATTC ACAGAGAAGC GTGAAGATGA ACAGCGGAGC AGAGATGACG GAAGAAGAAG CAGCAGCGGA ACAACAGAGA ATGTTTGCCG AAGCTCGAGC AAGAATGAAT GGAGGTGTTT CAGTTCCTCA ACCAGAGCAA CTAGAAGAAA CCCAGCAAAC AAGTCTACAA AGCTAATCAA CAAAATTTTT TAACATTATC CTTTTGACTT GTTTTTTCTC TGTAAAGTGC AAAATTCGTC GCGTCTTGGT GTTGATATGC TCTTTACATT TTTTTTTAAC CTAGATTTGT GTTTTTCCTT TAAATCACTT TGGTGATTCT GATGTAATTA GTAAGGTTTG TCTTGAATCT TAGCAACTAG CTTCATTTGA ATCCAAA
Length887
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3086884.. 3088362
Download Sequence
A.thaliana
AGI-codeAT5G08190.1
Descriptionnuclear factor Y, subunit B12
TAIR curator summary
Alias[NF-YB12]["nuclear factor Y, subunit B12"]
Gene coexpression
MR
MR Locus Description
12.6886 Ahg920487 S15/NS1, RNA-binding protein
26.1534 Ahg934926 RNA-binding (RRM/RBD/RNP motifs) family protein
35.242 Ahg315394 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative
57.9655 Ahg489001 Protein kinase superfamily protein
58.8643 Ahg944768 HSI2-like 1
67.1267 Ahg496070 telomeric repeat binding protein 1
79.806 Ahg491227 extra-large GTP-binding protein 2
80 Ahg937842 CYCLIN D3;3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression