Detail


ID : Ahg315394

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315394|fgenesh1_pm.C_scaffold_2000427
Sequence
ATGGAAGACG AAAGCAAGAT CGTCCCCAAG TTGCCAATCC TAGGCAAGAG AAATATACTA ATCACCAGTG CTTTGCCTTA CGTCAACAAC GTACCACATC TAGGAAACAT CATTGGTTGT GTTCTAAGTG CTGATGTCTA CGCTAGATAT TGTCGTCTAC GTGGCTATAA CACAATCTAC ATATGTGGAA CCGATGAATA TGGAACTGCA ACAGAGACAA AAGCTTTAGA GGAAAATTGT ACACCGAAAG AGATTTGTGA CAAGTACCAT GCAATTCATC AAGTTTATGA TTGGTTTGAT ATAAGTTTTG ATAAGTTTGG TCGAACTTCA ACTCCTGAGA CAAAAGTTTG TCAAGAGATT TTCAACAAGT TGTGGGAAAA CGAATGGATT TCTGAAGATA CTATGAAACA ACCTTATTGT GATACATGCA AGAAGTTTTT AGCTGATCGT CTTGTTTGTA AAACCACACC CGGGTTTCGC GACACGGACC ATTTGTTTCT TGAGCTTCCC TTGCTGAAAT ATAAGTTGAA AAAGTATATT AAAGAGACAT CTAGTAGTGG ATCTTGGAGT CGGAATGCTA TTCAAACGAC GGATGCATCG CTTAAGGAAG TGCCTAACGA TAGCGAAAAG GACGGGCTTA AGAAGAGATG CATCACAAGG GATTTAAAGT GGGGAGTTCC AGTTCCACAT GAGAAATATA AGGAAAAAGT CTTCTACGTT TGGTTTGATG CTCCTATTGG TTATGTTTCG ATAACTTCAT GTTACACATC GGAATGGGAG AAGTGGTGGA AGAATCCTGA GAATGTTGAG CTTTATCAGT TTATGGGGAA AGATAATGTG TTTTTTCACA CTGTCTTGTT TCCTTGTACG CATCTTGGAA CTGGTGAAGA TTGGACTATG ATGAAGACAG TTAGTGTGAC TGATTATTTA AATTACGAAG GCGGAAAGTT TTCGGAGAGT AAAGGTGTTG GAGTGTTTGG TAATGATGTG AAAGATACAA ATATCCCTGT CGAAGTATGG AGATACTACT TGCTGACCAA CAGGCCAGAG AAGTCTGATA CAACATTTAA ATGGGATGAT TTCCAAAAGA AACTTAATCA CGAGTTGCTA GCGAACCTTG GAAACTTTGT TTATCTAGTT TTGAGTTTTA TAGCAAAGCC TAAAAATAAA GGAGGTTATG GATCACTTGC TGAATATGCT GGAAAATTGG TGGAGGACTA TGTTAAAGTT ATGGAAAAAG TTAAGCTCAA GAAAGGGCTT CATACCACAA TGCTCTTATC GAATGAAGGG AACACATACT TGCAGGATAC CAATTTTTGG GAACTCTACA AAAAAGATAA ACCGTCTTGT GCAGTTGTTA TAAGAACTGC TGCTGGTTTA GTACACCTTC TTGCACGATT GTTAGAACCT TTCATGCCAT CTTTTTCTCG TGAGGTATTT AAACAGCTGA ATTTGCCACC ACATTTTTCA CTCTCCGAAG AGAAAGGAGA GGTATTACAA GCAAGTAGTC TTTGGGAGAT TCTTCCTTCC AACCACAGGA TTGGAACACC TCAACCATTG TTCAAGAAAA TGGAAGAGGA AGAGATGAAA CATTACAGAG AAAAGTTTGC TGGAAGTCAA GCTGATAGAC TTGCTAGGGA TCGCGAAATT ACCATGGCAA GACTTGATAT TCGAGTAGGT AAAATTGTGA AGGCTGAGAA ACATCCTAAG GCAGATTCAT TGTATGTAGA AGAAATTGAT GTTGGAGAAG ATCAACTTTA CACTGTTGTT AGTGGACTAG TTAAGTATAT ACCTCTTGAG GAGATGCAGA ACCGTTTGGT TTGTGTTCTT TGCAACTTGA AGCCGGCGAA AATGAGGGAG ATTGTGTCAC AAGGAATGGT TCTTGCCACT TCTAGTAGTG ATGGTAGCAA GGTGGAGTTA GTTGAGCCCC CTGAATCTTC TAAGATTGGA GAGCGAGTTA AGATTCCCGG GTTTGAAGGC GAGCCAGACA ATGTCTTAAA CCCGAAGACG AAAATATGGG AGAAACTTGT AGTGGATCTA AACACAAATG AGAATTTAGT TGCTTGCTAC AAAAATTTAC CCTTCACTAC ATCTGCAGGT GAATGCAAAG TTTCATCCAT TAGCAATGGC ACAATCCGAT AA
Length2142
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3974903.. 3977473
Download Sequence
A.thaliana
AGI-codeAT4G13780.1
Descriptionmethionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
33.3167 Ahg947658 Ataxia telangiectasia-mutated and RAD3-related
35.242 Ahg487654 nuclear factor Y, subunit B12
49.295 Ahg893505 NAD(P)-binding Rossmann-fold superfamily protein
53.4041 Ahg943669 DHHC-type zinc finger family protein
68.9348 Ahg935782 Kinase interacting (KIP1-like) family protein
69.9714 Ahg934754 ubiquitin-protein ligases
82.5954 Ahg477510 NC domain-containing protein-related
92.8978 Ahg482865 transcript elongation factor IIS
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression