Detail



ID : Ahg487679

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487679|fgenesh2_kg.6__813__AT5G08420.1
Sequence
CACCACCACC ACTTCTGATT ACGCCGTGTC TGTGATTTCA CTTGGTCAAA CATCATAAAG CTTTGCCGCC GTCACTTATA CGAATTAACT GACCTCTTCA ATGGCGGAGG TAGAGGAGCT TGAGCACGAG GAGCAGAATA TCGAGAAGAG GGTGAAGAAG AAAGGTAAAC ACGACAAGCC GAAACCATGG GACGATGACC CAAACATCGA CCGTTGGACA ATCGAGAAGT TTGATCCGGC ATGGAACCCC ACTGGTATGT TTGAAACCAG CTCCTTCTCC ACTCTCTTTC CTCAATACAG AGAGAAGTAT CTTCAGGAGT CTTGGCCAAG AGTTGAATCT GCTCTCAAGG AATACGGTGT CGCCTGCAAG CTCAACTTGG TTGAAGGTTC TATGACTGTT TGGACGACAA GGAAGACAAG AGATCCATAC ATCATTGTCA AAGCTAGGGA TTTGATTAAG CTTCTTTCCA GAAGTGTCCC TGCTCCTCAG GCTATTAAGA TTCTCGAAGA TGAGATGCAA TGTGATATCA TCAAGATCGG TAACTTGGTT AGGAATAAGG AAAGATTTGT TAAAAGAAGG CAGCGGCTTG TGGGTCCTAA TTCTTCTACC TTGAAGGCGC TGGAAATATT AACCAACTGT TACATTCTAG TTCAGGGAAG TACTGTAGCC GCAATGGGTC CATTTAAAGG TCTCAAACAG CTCAGAAGGA TTGTGGAAGA CTGCGTACAG AATAAAATGC ATCCTGTATA CCATATAAAG ACTCTCATGA TGAAAAAGGA ACTGGAGAAG GATCCAGCTC TTGCAAACGA AAGCTGGGAT AGGTTTCTTC CCACATTCAG GAAGAAAAAT GTTAAGCAAA AGAAACCCAA AAGCAAGGAG AAGAAGCCAT ACACACCTTT CCCACCCCCT CAACCACCTA GCAAGATTGA TATGCAGTTG GAGTCTGGAG AATACTTTAT GAGTGACAAA AAGAAGTCAG AGAAAAAATG GCAGGAGAAG CAAGAGAAAC AGACAGAGAA GAGTACTGAG AACAAAAGAA AGAGAGATGC CTCATTCCTC CCACCTGAGG AGCCTATGAA CAACAATAGC AAGGCAAACA ATTCAGAGGA TGGAAAGAAT GACATAACCG AGCTAACACA ATCCTTGAAG AGCAAGACAA AGGAGTTTAA AAAGCAGAAA AAGACACACG AGAGAGTGAA TGCAGAGGAG TATATTGCTG GTCCATCTTC TATTGATAAA CCTGCCAAGG AGAAGTCCAA AAAGAATAGA GATTAATTCT TAAACCTGTT TTTTTTTAAA AAGAGAAAAA AGATTGAAAC TTATCTTTGC TCAAAAG 
Length1337
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3176205.. 3178950
Download Sequence
A.thaliana
AGI-codeAT5G08420.1
DescriptionRNA-binding KH domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.6356 Ahg359344
31.7805 Ahg941581 Ribosomal protein S8e family protein
32.5576 Ahg894139 histone deacetylase 2B
48.3425 Ahg311324 60S acidic ribosomal protein family
49 Ahg940604
60.5392 Ahg478476 eukaryotic translation initiation factor 3G1
62.3538 Ahg347994 breast basic conserved 1
70.5549 Ahg490470 Transcription factor jumonji (jmjC) domain-containing protein
76.6029 Ahg475376 Ribosomal protein S5 family protein
78.7655 Ahg476548 Ribosomal protein L6 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression