Detail



ID : Ahg487691

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487691|fgenesh2_kg.6__825__AT5G08520.1
Sequence
TTCCCCTTCC TTTAACAATG GCGTTTTGAC CTCTCTCTCT CAGTCTTCTG GGTTTTTCCA ATTTCCCTTT CTCTCTCTCT CTCTCCTTCA AGTTGCTGCA ATCCCTAGAA AACCCCCAAT TTGATTTTCT TATAAAGTTC ACATTTTTTC TTCTTCTGCC AATCCTCTTT TTCCCTCGTT TCAATCTCCG TTTTGCTTTT GGCTATCAGA TATTCTATCT CATAACGATA AGTTTAATTC ATCTTTGCGT CTTAGTTCAT CAGTAGAGAG AGTAGGGTTT TTTTCTCTTT ATATCCGTAG TTTAGTTGTA TGGTTGGGCT TTGATTGGAA TATCAAGGCT AGTTTTTAGC TAGGTTCAGT GATACTTGGA AGATCTGAGT TCTTCGTGTG TTTCTCAGCT TTGTGGAGAT CTAAAAGACA CGAAATTTGC TGAAATCTGG TTGATATCCC AGATTTTTTA GAGGGATTAG GGTAGATTCT GTTGAATTTG TGCGGGTTTG ATTGGAAACA TGACGGTGGA GGAAGTTAGT GATGGTTCTG TGTGGAGTAG GGAGGATGAT ATTGCCTTTG AGAGAGCTCT AGCTAATAAT ACTGATGAAT CAGAGGAACG CTGGGAGAAG ATTGCTGCTG ATGTTCCAGG GAAAAGTGTT GAACAGATTA AAGAACATTA TGAGCTTTTA GTTGAAGATG TTAGTAGGAT TGAATCAGGA TGTGTGCCTC TTCCTGCCTA TGGGTCTCCT CAAGGATCAA ATGGTCATGC TGGTGATGAA GGAGGAAGTA GTAAGAAAGG AGGTAACAAT CATGCGGGAG AGTCTAACCA AGGAGGTAAA TCAAAGTCCG ATCAAGAACG ACGAAAGGGT ATTGCGTGGA CAGAAGATGA GCACAGGTTA TTTCTTCTTG GTTTGGATAA GTACGGGAAA GGTGATTGGC GTAGCATTTC TCGCAACTTT GTAGTAACAA GAACACCGAC CCAAGTCGCG AGCCACGCTC AAAAGTATTT CATTCGTCTA AACTCAATGA ACAAAGACAG AAGGCGATCA AGCATTCACG ACATCACTAG TGTTGGCAAC GCAGATGTCT CAACGCCACA AGGACCAATC ACTGGTCAGA ACAACAGCAA CAACAACAAC AACAACACCA GTTCTCCTGC TGTTGCTGGA GGAGGAAACA AATCAGCCAA GCAAGCCGTC TCTCAAGCAC CACCTGGAGC TCCTATGTAT GGAACACCCA CCATAGGTCA ACCAGTAGTT GGAACACCAG TGAACCTCCC AGCTCCACCT CACATGGCTT ATGGAGTCCA TGCTGCTCCA GTCCCTGGCT CGGTGGTTCC TGGTGCAGCA ATGAACATGG GTCAAATGCC GTACACCATG CCGCGCACAC CAACGGCTCA TAGGTAACTC GAAAGCACCT TTGCAGTGAT AGTGCACTTG GTTTTAGGTG TAAGAAAGAT GTGTAAAGGA TTTAGTGAAT ATTCAAAGCT TGTTCCTTGA GTGAGTTTTT TTTATTACTT AGTTTGTGGG GATTTTGTAT GAGGTCCGAA TAAGATATTA AGATGACATG ATTAGTTTGC AGACTCCAGA AGCAAAAAAA CTCTTCTTTG TATGTGAACA CAATAAAGCC TCTGTTATGA GGCTTACA 
Length1638
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3401719.. 3404922
Download Sequence
A.thaliana
AGI-codeAT5G08520.1
DescriptionDuplicated homeodomain-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.68115 Ahg496326 Integrase-type DNA-binding superfamily protein
9.59166 Ahg951876 Protein of unknown function (DUF569)
22.8473 Ahg921660 AP2/B3 transcription factor family protein
26.9815 Ahg929903 sugar transporter 4
27 Ahg471984 Protein phosphatase 2A, regulatory subunit PR55
32.1248 Ahg312977 catalase 1
33.5857 Ahg926577 PATELLIN 1
46.0977 Ahg487338 Glycosyl hydrolase family 85
47.9583 Ahg496148 pseudo-response regulator 3
49.2443 Ahg473005 B-box type zinc finger protein with CCT domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression