Detail



ID : Ahg487715

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487715|fgenesh2_kg.6__849__AT5G08730.1
Sequence
ATGGAAGCCG ATGGTCAGAA ATACTCTGTT CTTGAGAAAA CACAAGTTCG TGAGAAGATG ATGAAAGAAA TCGAACAGAT CTCGGAAGTC TTCTCGGTTT CAAAATCCGA CGCAACCGTA ATCCTAATCT GTCTCCGATG GAACTCGTTT AAGGCTTCAG ATCTTCTTGG TGACAACAAG AAGAAGTTTC TGGCGAAGTT AGGGCTGGTT CGAGTTTTCA ATTCCAACTC TTCTTCTGCA GATCGTGAGA CGGGTGATGG AGATTACTTA GTCTCCACGC CCTTTTGCTC ACACAAGTTT TCAACAACTT GCTGGAGTGA ATATCTCAGC GATGCTCTGG AGAAGAACAA GGAGGAGAGA GGACTCATCT CTTGCCTTAA CCAAGACTGT GTCGCTTCCG TTGGACCCGA TACGATCGAA AAACTCACTG AGCAAGTGAA GGTGATGTAC GAGAATTATG CTCTCGAATC ATTCATGGAG TGCCATAAGG GAACGATCAA ATGGTGTCCT GCATCGGGGT GTGAATACGC TATCGAGCTT CAGGAGGATG GTAATGAAGA TAATGTGACT GTGGTTTGTT TGTGCGGCCA CACCTTCTGC TGGACATGCC GGCTTGAGTC ACACCGACCG GTGTCTTGCA AAAAAGCATC AATTTGGTGG ACGTACCTGT TGGATCAGTC AAGAAGCATT TCTTGGATCC ATGCAAACAC CAAACCTTGT CCCAATTGCA AGAGTCCTGT GCAGCAGAAT GGTGATCCTG ATTACAGGCT CATCACTTGT ATATGCAGTC ATAGCTTCTG TTGGATCTGC TTGCGCACGG AGGAAGACCA TAATGGGAAC TGGAACTGTG CTCCAGTCAC TGTTCCAGCT GCGGATCCTA CAACCGCCGA ATTCTCTCAC ATTCTCCACC TGAATCTGTG GGAAGGAGGT CATGAAGCAT TGGAGAAGGC TAAGTCCAAG CTGAGAGCCT TAGAGGAAAA AACCATTCCG AAACTAGTTG AGAATTGTGG ATTGAGCGAG CTGGACATTA GGACAGTAAG AGAAGCAGGG ATACTTAGTG TTCAGTGCAG GCAGGTACTG AAATGGAGCT GTGTTTTTGA CTACTTCATA ACCGAGTACG AAAGCACGAA GAAGCAGTAC ACGAAACACC TCATAGGTCA AGCGAGCGCA ATGCTTTGTA CGCACGAAGG GAAGCTTGAT GAGTCGATGT ATCGAGCCCT CTCAGGTGGA GATTTCACTT TCTTTAAGCA CATGTTGGAA ACCAGTACAA CATACACTGG TAACTACTTC GATGCATTCA TCAAGGATCT GGAAGATGGT AAGCCGCCTG AAGTGAAGGC TGATGCATAT GAGGATGGAC AAAGCAGTCA CTGGTTCTGC GATAGGTGCA CGTTTGAGAA CAGCTGTGAT GATAAACAGT GCAAGATGTG CTTTTACTCT CTGGGCTCTC CTCATGTGGC AGCAGCTCCT GAAGACCTTG GAAAATTGGA GTG 
Length1493
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3501965.. 3503547
Download Sequence
A.thaliana
AGI-codeAT5G08730.1
DescriptionIBR domain-containing protein
TAIR curator summary
Alias[ARI16][ATARI16][ARIADNE 16][ARABIDOPSIS ARIADNE 16]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg946735
8.83176 Ahg942788 arginosuccinate synthase family
13.4164 Ahg907307
14.1421 Ahg900114
15.8114 Ahg897335
16.6132 Ahg478496 Uncharacterised protein family (UPF0497)
20.347 Ahg908193 lupeol synthase 2
21.7945 Ahg950161
24.3721 Ahg889070
32.187 Ahg891380
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression