| Annotation |
|---|
| Description | jgi|Araly1|488060|fgenesh2_kg.6__1194__AT5G12180.1 |
| Sequence |
AAAAAAATAA GAGAAGAAAG ACAAAATCTA AAACCTTTCT ATTTCTCTTC CTCCTTTGAG CCTTTACCTC CTCCATCTCC CCACCCTTTT ATGCAACAAT GGGAAATTGT TGCTCTCACG GACGGGACTC AGCCGATAAC GGAGATGGAC ACACACTGGA AAACGGAGCT ACCGCTTCAA ATGCTGCCAA TTCCACTGGT CCAACCGCGG AAGCTTCGGT ACCACAATCG AAACATGCGC CTCCTTCTCC TCCTCCGGCA ACCAAACAAG GCCCTATAGG ACCTGTCCTA GGTCGACCCA TGGAAGATGT AAAATCTTCA TATTCTTTAG GGAAAGAGCT CGGGCGAGGC CAATTCGGTG TCACACACCT CTGCACACAG AAGGCAACAG GTCATCAATT TGCTTGCAAG ACCATTGCGA AAAGGAAGCT TGTGAACAAG GAAGACATTG AGGATGTAAG AAGAGAAGTG CAGATAATGC ATCACCTGAC TGGTCAGCCA AACATTGTGG AGCTTAAAGG AGCTTATGAG GATAAGCATT CCGTGCATTT GGTTATGGAG CTTTGCGCAG GTGGAGAGTT GTTCGATAGG ATTATTGCTA AAGGACATTA CTCGGAGAGA GCAGCTGCTT CGTTGCTAAG AACGATTGTT CAGATTGTGC ATACTTGCCA TTCCATGGGG GTGATTCACA GGGATTTGAA ACCAGAGAAC TTTCTCTTGC TCAACAAAGA TGAGAATTCT CCTCTCAAAG CTACTGACTT TGGGTTGTCG GTTTTTTACA AGCCAGGAGA GGTGTTCAAG GATATTGTGG GGAGTGCTTA TTACATCGCA CCAGAGGTTT TAAAAAGAAA GTATGGACCA GAGGCAGATA TTTGGAGTAT TGGTGTCATG TTGTATATCC TCTTATGTGG TGTCCCACCA TTCTGGGCTG AGTCGGAGAA CGGGATATTC AACGCCATCC TAAGGGGACA TGTTGATTTC TCAAGTGATC CATGGCCATC TATCTCGCCT CAGGCGAAGG ATCTTGTTAA GAAGATGCTC AACTCTGATC CCAAGCAAAG ATTAACTGCT GCCCAAGTTC TCAACCATCC ATGGATCAAG GAGGATGGAG AGGCACCAGA TGTTCCTCTT GACAATGCGG TGATGTCAAG GCTCAAGCAG TTCAAAGCAA TGAACAATTT CAAGAAAGTT GCATTACGGG TGATAGCAGG CTGCTTATCA GAGGAAGAGA TCATGGGGTT GAAGGAGATG TTTAAAGGTA TGGACACTGA TAGCAGTGGA ACAATTACAC TCGAGGAGTT AAGACAGGGA CTTGCCAAGC AAGGTACAAG GTTGTCAGAA TATGAAGTTC AGCAGCTAAT GGAAGCTGCT GATGCTGATG GTAATGGAAC AATAGACTAT GGTGAGTTTA TCGCAGCAAC AATGCACATC AACAGACTTG ACAGAGAAGA ACATCTTTAC TCAGCCTTCC AACACTTTGA CAAAGACAAC AGTGGATATA TCACAATGGA AGAGCTGGAG CAAGCCCTCC GGGAGTTTGG CATGAATGAT GGCAGAGACA TTAAGGAGAT CATTTCCGAG GTTGATGGAG ACAATGATGG TCGGATAAAC TATGATGAAT TTGTGGCAAT GATGAGAAAA GGAAACCCGG ATCCAATCCC AAAAAAGCGG CGTGAACTTT CATTCAAATG AACAAATTGT TGAAGTAGAG GAAGAGAGGA GATAGAAAGA GAGTTACACA CAGGGGTCGA GAAACTCATC TTCCTTTTCA CAATGAGAGA TAAGGCAAAG CAAATATCAA AAAAGTATAT GCTCAACTGG AGGAGATCTT TAAGGGAGGA GAAGGATCAA GAAGGGGGGA GGTGTTTGAA TTATGTATAT TTTCTTTTCT GGTTTGTCTA CTACTGCTTA AAGTGCCATG ATGGGTTTCT CAATGTACTT |
| Length | 1940 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4758593.. 4761192 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G12180.1 |
| Description | calcium-dependent protein kinase 17 |
| TAIR curator summary | member of Calcium Dependent Protein Kinase |
| Alias | [CPK17][calcium-dependent protein kinase 17] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.4929 |
Ahg479716 | Domain of unknown function (DUF26) |
| 39.7618 |
Ahg335709 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| 40.4475 |
Ahg918583 | Auxin efflux carrier family protein |
| 45.7165 |
Ahg492707 | NITRATE TRANSPORTER 1.8 |
| 47.6865 |
Ahg481664 | transposable element gene |
| 61.8708 |
Ahg484387 | cytochrome P450, family 71, subfamily B, polypeptide 21 |
| 63.1664 |
Ahg311505 | YUCCA 9 |
| 67.6757 |
Ahg489785 | RING/U-box superfamily protein |
| 70.1071 |
Ahg927887 | MATE efflux family protein |
| 76.7072 |
Ahg920303 | Uncharacterised protein family (UPF0497) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|