Detail



ID : Ahg488108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488108|fgenesh2_kg.6__1242__AT5G12900.1
Sequence
TCTCTCTCTC TTCTTCACAC ACACAGAGAC ATCATCCTCA TCACACCCTA TTCCTTGCAC AATCGCATTC ACTATCTCTT CTCTCTCTTT TGTGTCACAT CCTTCTCTTC TCTTCTAATC TTGTTCTTGT TCTGCCATGG CTTCTTCTGA AACAAGAATG AACAAGGCAA GAGAAAAAGA AGAAGCCATA GCAAATGGAG TGAAGCTGAG AGCACTTCAA GCGAGTCTTA TGCAGATGAA GTCAAGCCCA TCTTCCAATT ACAGTCTCAG AAACCCTTCT TCTTCTTCTG CTGCTTCACC TGCTTCTCGT CCTCTCCCTA ACCTCTCTGC TCATGATTAC CCTGTTTTCA CTCCTAGCTA TGAAGATGAG CCTGTGTCTG CATTTCATCA CAAGAATCTC ACTTTATCTG AGACTTGGGA TGAAGATGGT GTTGGTTTAG TAGATGGAGA TACTTATCTC TCTGATTCGT ACAAAACCTC AACTTCAAGA AAGACTGTGA TGCCTAATCA AGATTCTCAT CATCATGTTT ACACGATGTC GGACGCTCTC AGGTCTCCAC CATTACATTT TTATACAACC GGTAGAAGCA ACAATGGCTC GGTTGACTTT AGATCGGTCT CTTCTTGCAA TGACTACAAT AAACAAAGAG GTTTCGATAC CAAGAGCTTG AAGAATTCTA ATCTTGTTGT GCCCTTGACG GATTCGCACT CTGCTGTTGT TTCTTCTCAG CCAAGAAACC GTGGAGGAAG AGTGATGTCT TGGTTATTCC CTAAGTTAAA GAGAAAGCAA AAGAGTAATT CAATCTTTAA CTCACCTAGT AGAACTGAGA AATCAGAGGA AGTTTCCGAG GTGTTGAAGG ATTCAGGTGT TGAGAAGTTG AAAAGAGAAT TGATGGAAGC AAACAGAAGT AGGGATGCTG CGTTAACACA AGTCTTAGAG ATGAAATCTT CATTGGGAGA GTTAAGTGAG AAGCTTCAGT ACTTGGAAAG TTACTGTGAC AATTTAAAGA AAGCTTTGAG AGAAGCAACA GAAGTAGTGT CACAGGAGAA TAGTGTTGGA AGAAGCTCAG GGAAGAAGAA CTCAGAGATG CCAGTGAGTG AAGAAGTGAT GGTTGAAGGG TTCTTGCAGA TTGTATCGGA AGCAAGATTA TCGATAAAGC AATTCTTGAA AACATTAGTT TCAGAGATCG ACGAAGAAGA CTCTACTCTA ATTGGTAACA TCAACACTCT CCTTCAACCC CACAACTTAT CATTCACCTC TAAGTACTCC AAAATCATTC AGTACCACTT AGAAGCGATC ATAAGCCAAT CAGTATACCA AGACTTTGAG AACTGCGTTT TCCAGAAGAA CGGTAAGCCG AAACTGCTTG ATCCGGAACA AGATAGACAA GCGAATTTCT CGTCATTTGC TTCTTTGAGA AACTTGAGCT GGAACGAGGT ATTGAAAAAG GGTACAAAAT ACTACAGTGA TGAGTTCAGT AGATTCTGCG ATGAGAAGAT GAGTCTGATC ATTACAACAT TGAATTGGAC AAGACCTTGG TCAGAACAAA TGCTTCAAGC ATTCTTTGTG GCTGCAAAGT GTGTATGGTT GCTTCATTTG CTTGCCTTCT CGTTCAGTCC AGCGTTAGGG ATCTTGAGAG TTGAGGAGAA CAGAGAGTTT GAATCGGGTT TTATGGAAGA TATGGGTGCA GATAGGCAGA GATCAGCATC GTCCCGTGGA CCGGCACGGG TTAAGGTTAT GGTGATGCCT GGGTTTTATG TTCAAGATAG GGTTTTGAGA TGTAAGGTCC TTTGCAGGTA CAAGTCATTG GGCTGAACTG AAGAGAGTCA CACTCACTCT AGTCTAATCA AGATTGATTG CTTCTTAATT AACTTTTCTT ATTGTTAATC TCTTGTGGTT TCTATACCTA GGCTTCAGTG ATCTTTTTAC ATTTGTCTTT GTTAAGAATA TTATAGGTTT TTAATTTTTG TCAAATAGTA GTTGTCAAGG AGATTTTGTA TT 
Length2002
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4947152.. 4949701
Download Sequence
A.thaliana
AGI-codeAT5G12900.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.2971 Ahg492529 Disease resistance protein (TIR-NBS class)
19.6977 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
23.2379 Ahg489527 Galactose oxidase/kelch repeat superfamily protein
24.98 Ahg479245 Leucine-rich repeat (LRR) family protein
32.5576 Ahg494701 Leucine-rich repeat protein kinase family protein
33.2716 Ahg927211 Glycosyl hydrolase family protein
34.4093 Ahg477440 serine carboxypeptidase-like 25
35.242 Ahg924896 ARM repeat superfamily protein
40.6571 Ahg492491 cytokinin response factor 2
40.7922 Ahg492992 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression