Detail



ID : Ahg488278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488278|fgenesh2_kg.6__1412__AT5G14380.1
Sequence
ATCCTAAAGC TTTTGCAGTA TTTCTCTATA GAATAAGAAA AATAAAACAA AAAAATAAAA TTAAAAAATA CTGCTTTAGC TTTTGGAGTA TCCTCCTTTT AATCTCAATA AAAAAAAAAT GGCACGCCAA TTTGTCGTTT TGGCCCTATT GGCTTTAACC ATCGCCAGCG TTTTCGCCGC TGACGCTCCA TCAGCTTCCC CCAAAAAATC TCCATCACCC ACCGCCACAC CAACCAAGGC TCCTGCAGCC CCAACCAAGG CTCCGGCAGC TCCAACCAAG GCTCCGGCTG CCGCACCTAA ATCATCCTCG GCCTCTTCTC CCAAAGCATC TTCCCCTGCT GCTGAAGGAC CAGTCCCCGA TGATGACTAC TCTGCCTCCA GTCCTAGTGA CTCCGCCGAG GCACCTACTG TCTCCTCCCC ACCGGCTCCC ACCCCTGACA GCACCTCCGC TGCTGATGGA CCAAGCGATG GACCCACTGC GGAGTCACCC AAGAGTGGTG CCGTGACAAC CGCTAAGTTC TGTGTTGTCG GCACAATCGC CGCCGTCGGA TTCTTCTTCT TTTCTTTCTA AGTTAAATTG TCCACGTTTT GCTTGGATGG ATCAGAGATT TGTATAATCT TTTGAGTTGA GGCAGTAAAT TTATTTTATA TATACGTTTA TAAATCGAGA TTAACTGGAG TAAATATAAA CCTAAATGTC GTTATGAAAT TTTGTTAGAA CAAATGTTTC ATATTTTGTT TAATAAAAAT TATTTTTTGG AAATGCATAT GATTCTTGTG GTCTAATGTC TTTTAGTTCC TATTGTCATA TGTTGTGAAT GAATGTGTAG ATATCATAAA TGATATAAAT G 
Length851
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5591276.. 5592155
Download Sequence
A.thaliana
AGI-codeAT5G14380.1
Descriptionarabinogalactan protein 6
TAIR curator summaryEncodes an arabinogalactan protein that is expressed in pollen, pollen sac and pollen tube. Loss of AGP6 function results in decreased fertility due to defects in pollen tube growth.
Alias[AGP6][arabinogalactan protein 6]
Gene coexpression
MR
MR Locus Description
21.4709 Ahg486726 VANGUARD 1 homolog 2
40.694 Ahg487214 Cytochrome P450 superfamily protein
67.9338 Ahg487033
71.8958 Ahg904884 RNA-binding protein
76.9415 Ahg945635 isopentenyltransferase 4
88.2043 Ahg359114 transposable element gene
97.9183 Ahg912947 Polyketide cyclase/dehydrase and lipid transport superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression