Detail


ID : Ahg488299

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488299|fgenesh2_kg.6__1433__AT5G14580.1
Sequence
GGTGCGTTAA ACCCTTCCCG TTCTCCTTCC CTCTCTCTCT CTACTACTCC ACATCTCCCA CTCTCTCTGT GTATGTATAA TGTCATCGAT TGTGAATCGA GCTAGGTCAA CATCTCTTCC TAATTTCCTC GCATGGCGTG CTTTGGGTTT TCGCACCATC TGCTCCGGCC GCCTTGGTTT CGCTCCGTCT AATCCAGACT CGCCGGCCTC TGCAGGAACC AAAATTTTGG AGTCTTTAAA GGAGGAATTC GAAGTCGGAT CCCGAGTGGT CTCCTTTGAG ACGGGAAAAA TCGCCCGCTT TGCAAATGGG TCCGTCGTCC TCGGCATGGA CCAGACCAAA GTGCTCTCTA CTGTTACTTG TGCTAAGACT GACTCGCCTC GGGACTTCTT GCCTCTCACT GTTGACTATC AAGAGAAGCA ATACGCTCAG GGTTTGATTC CAAATACGTA TATGCGAAGA GAGGGTGCAC CAAAGGAGCG GGAGCTGTTA TGTGGCCGGC TCATTGATAG ACCAATCAGA CCATTGTTTC CTTCAGGGTT TTACCATGAA GTTCAGATAA TGGCTAGTGT TCTATCGTCG GATGGGAAGC AGGATCCAGA TATACTGGCA GCTAATGCAT CATCAGCTGC GCTCATGCTA TCAGATGTTC CATGGGGAGG GCCCATTGGA GTCATCCGGA TAGGAAGGAT ATGTGGGCAA TTTGTTGTCA ATCCGACTAT GGATGAGCTT AGCTCAAGTG ATCTCAATTT GATATACGCT TGCACAAGGG ATAAGACTAT GATGATTGAT GTTCAATCCC GTGAAATCTC AGAGAAAGAT TTAGCAGCTG CTCTGAGGCT AGCTCATCCA GAGGCTGTTA AGTACCTTGA TCCCCAAATA AGATTGGCAG AAAAAGCTGG GAAACAAAAG AAGGAGTACA AATTGTCCAT GCTTTCTGAG AAAACTTTAG AAAAAGTGAC TGACTTGGCT GCAACACGTA TTGAATCCGT CTTCACCGAC CCTTCATATG GAAAGTTTGA ACGTGGAGAG GCTCTAGATA ACATTGGAAA AGATGTAAGA AAAGTATTTG AAGAAGAGGG TGATCAAGAA AGCTTGAGCA TCCTTCCAAA GGCTGTTGAT ACAGTGGGAA AGAAGGTAGT CCGTTCAAGG ATGATATCAG ATGGATTTCG AGTCGACGGA AGACATCTTG ATGAAGTTAG GCCCATCTAC TGTGAATCGC ATTACTTACC TGCGCTGCAT GGATCAGCAC TTTTCTCTCG TGGAGATACG CAGGTGCTCT GTACTGTCAC ACTTGGAGCC CCGGGAGAGG CACAAAGCTT GGATTCCCTT GTTGGCCCCC CGAAAAAGAG ATTTATGCTT CACTACAGCT TTCCACCATA TTGTACAAAT GAAGTCGGAA AACGAGGAGG CCTTAACAGG CGTGAAGTTG GTCATGGAAC ACTTGCTGAG AAAGCATTGC TTGCTGTCTT GCCCCCCGAA GAGGCTTTTC CTTATACTGT TCGTATAAAT TCAGAAGTAA TGTCCTCAGA TGGATCCACG TCGATGGCAA GTGTTTGTGG AGGTAGTATG GCATTGATGG ATGCCGGAAT TCCTCTGCGA GCTCATGTTG CGGGTGTATC CGTTGGTCTT ATCACCGATG TGGATCCATC AAGTGGTGAA ATAAAGGACT ACCGTATAGT AACCGATATT CTCGGTTTGG AAGATCATCT TGGAGATATG GATTTCAAGA TTGCTGGCAC ACGAAATGGT GTGACGGCGA TTCAGCTGGA TATAAAGCCA GCTGGAATAC CATTGGACAT AGTTTGTGAA TCCTTAGAAA ATGCACGTGA AGCCCGTCTT CAGATTCTTG ACCACATGGA GAGAAACATA AATTCCCCCC GAGCCCAGGA TGGGGCTTAT TCACCTCGGC TAGCAACGTT CAAGTACACC AATGACTCAC TTCGTAGCTT GATCGGACCT ATGGGTGTAC TCAAAAGAAA GATTGAAGAG GAAACAGGTG CAAGATTGTC TATTGATAAT GGAACATTAA CTATTGTTGC CAAGAATCAG GATGTGATGG AAAAGGCCCA AGAAAAGGTT GACTTCATCA TTGGTCGTGA AATAGTTGTT GGTGGCGTGT ACAAAGGCAC AGTGACATCT ATAAAAGAGT ATGGTGCATT TGTTGAGTTC AGTGGTGGTC AGCAAGGTCT ACTACATATG TCTGAGCTAT CTCATGAACC AGTCTCCAAG GTTTCAGATG TATTACATAT TGGCCAGTAC ATCACTACGA TGTGCATCGA AACCGATGTC CGGGGTAACA TTAAATTATC CCGCAAAGCA ATGTTGCCCA AACCCGAGCG CAAACCAGCA TCTGATGCTG GAAAAGACTC GGTGATGAAA GAGTCGTCAA CTGTCTACAC AGAAACGTCT AGTGTTGGAG AGACTGTTGC AAGCATGCCC AGTATCGTAA CGCCACCTCA GAAATCTAAA TTATCAGTTC CTGCAGTTGT CATCCGTACT GCTGTGGAGT GTCATGAGGC AGAGAAATCT TCCCCTGTGA ACAAGAATGA CAAACCCAAA CGCGCTACGA CACCGAAGCC AGACCGGAAA CCCAAATCCA CTGCCTCTAA ACTGACTGCG ACACAGAAGG AAGAGGAGGT ACTCGAATCC ATTGCTCCAG AAGAAACTCC AGCTGAATGC GGTGAGACAC TGAAGCAGGA CGGGAAGCTA AAATCCGCTT CGCCCAAAAA CAGTAGCACT GATTCTAACC TAGTATCATC TTCAAAAGCT AAGAAATCAA CTAGGAAGGA GAATCAATCA GAGAACAAGG CTGAAGAGAG TGCATTCGTT AGTACCCGAA ATCTGAAAAT AGGAACAGAA ATGACGGCCA AGGTCCACGA GATTCGAGCC CGTGGATTGG TTCTTGATTT AGGTGGTGAA CTCCGTGGTA TGTACAAATT CAAGGAAGAT GAAGAGACAG AGTTTGAAGA GGGAGACACA TTGCAAGTGA AATGTACAAG TTTTAGTACT AAAGGAATCC CTGTGATGGC TTTGGTTGAC GAAGAGGGAG AAGAATAGTG GTAAACTCTC TTTCCTCTCT AGAAGGTTTT TAACCCAAGG TTCATACGAG AGTTTTGCTT GAAATGTTTT TAATATACGG ATCGAATCAA GAGAAGATCT TTAGCTGCTT TTGATGAGCA AATCTTGGTA GATAGATTCA TTGGCGTCAC AACTTGAGGA AAACTAATGA AATCAGTTAG CGTAACTCGT CTTTTACTTT GGCCTTGTGA TGTGCCGTTT TGTTTCTCTT TTATTGGGTG GTTTTGTGGA ACCGAAAGTG GATTGTATGG TTTAGTGTTT TAGTAACTGA CGTATGAAAG GTGCGTAACG TTAAGTTTCA TCTTTTTTGT CCAATTTCTA C
Length3401
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5660030.. 5665789
Download Sequence
A.thaliana
AGI-codeAT5G14580.1
Descriptionpolyribonucleotide nucleotidyltransferase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg909999 GTP binding Elongation factor Tu family protein
6.245 Ahg897736 polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein
8.83176 Ahg941174 Transducin family protein / WD-40 repeat family protein
9.48683 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.79796 Ahg920318 ARM repeat superfamily protein
10.9545 Ahg496832 P-loop containing nucleoside triphosphate hydrolases superfamily protein
13.0767 Ahg937581 Pentatricopeptide repeat (PPR) superfamily protein
20.3715 Ahg486304 Ubiquitin carboxyl-terminal hydrolase family protein
20.4939 Ahg480518 Transducin family protein / WD-40 repeat family protein
23.4521 Ahg327675 pentatricopeptide (PPR) repeat-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression