| Annotation |
|---|
| Description | jgi|Araly1|937581|scaffold_501772.1 |
| Sequence |
TAGTAGCTGC CTGCTGTAGC CATGTACAGA TCAAAGGCAA TCCTGTCTTC TCTTCGTAAC GCTTACTCAC AGATCTCTAC TCGATCGTAT CTAAGCAGAG CTCAGGTGGG TTTTTCCTCG CACTCGATTT CGCCTCTCGA TTCATTTGCA ATCCCTAGTC GATTCCTTTG GAAATTCCGA ACCTTTTCTT CGAAACCAGA TTCTACGCTT CAATTAGTAC TTGAGAACGA TTGGTCTAAG GAAGTAGAGG AAGGATTGAG GAAACCGGAT TTGTCTTTAA CACACGAGAC TGCGATTTAC GTTTTGAGGA AATTGGAGAA GTATCCTGAA AAAGCTTATT ACTTTCTTGA TTGGGTTTTG CGAGATTCAG GGCTTAGTCC AAGTACTCCA CTTTATAGCA TTATGTTGAG GATTTTAGTG CAGCAGAGAT CTATGAAGCG GTTTTGGATG ACTCTGAGTG AGATGAAACA AGGAGGGTTT TATTTAGATG AGGATACTTA TAAGACTATT TATGGTGAGC TTAATAAGGA GAAATCGAAA GCGGATGCTG TGGCTGTGGC TCATTTTTAT GAGAGAATGC TTAAGGAGAA TGCTATGTCT GTTGTTGCTG GAGATGTTTC TGCTGTTGTT ACGAAGGTGG ATTGGAGTTG TGAGGTTGAG AGGGAATTGC AGGAGATGAA GCTCGTTTTG TCGGATAATT TTGTTATCAG GGTGTTGAAG GAACTAAGGG AGCATCCCTT GAAAGCTTTG GCGTTTTTCC ATTGGGTTGG TGGCAGTTCT TCTGGTTATC AACACAGTAC TGTTACTTAT AACGCGGCTT TGAGGGTTTT GGCCAGGCCT ATTTCGGTTG CTGAGTTTTG GAGTGTTGTT GATGAAATGA AGACCGCAGG GCATGAGATG GATCTTGACA CTTATATAAA GGTTTCTAGA CAGTTTCAGA AATCTAGAAT GATTACTGAG ACAGTTAAGC TTTATGAATA TATGATGGAT GGTCCGTTCA AACCATCTAT TCAAGATTGT AGTCTTTTGT TGAGGTATTT ATCGGCTCGT CCCAACCCAG ATTTGGATTT GGTGTTTCGG GTTTCAAGGA AATATGAATC AACAGGGAAG TCTCTCTCAA AAGCTGTTTA TGATGGAATC CACAGGTCTT TAACCAGTGT AGGTAGGTTT GACGAAGCAG AGGAAATCAC GAAGGCTATG AGAAATGCGG GTTATGAGCC AGATAACATC ACATACAGCC AACTCGTGTT TGGGCTTTGT AGAGCTAAGA GATTAGAAGA AGCACGCAGA GTCCTTGATC AAATGGAAGC ACAAGGATGC TTTCCCGACA TAAAGACTTG GACTATTCTG ATCCAAGGGC ACTGCAAAAA CAATGAATTG GATAGGGCCT TGGAGTGTTT TGCGAATATG CTAGAGAAAG GGTTTGATAT TGACTCTAAT CTGCTTGATG TCTTGATAGA TGGGTTTCTT ATCCAAAACA GGATCGAGGG GGCAAGCATA TTCCTTATGG AGATGGTGAA AAATGCCAAT GTAAAGCCTT GGCAAAGCAC TTACAAACGT CTTATAGACA AGCTGCTAGA GATCAAGAAG GGCAAAGAAG CGCTAGATCT TCTTCAGTTG ATGAAGAAGC AAAATTACCC TGCATACGCA GAAGCTTTTG ATGGATACCT TGCAAAGTTT GGGACTTTGG AAGACGCTAA GAAGTTCTTG GATGTGCTAA GCTCCAAGGA TTCTCCTTCC TTTGCAGCCT ACTTTCATGT CATTGAAGCT TTCTATCGAG AAGGAAGACT CACTGATGCG AAAAATCTTC TCTTCATATG TCCCCATCAC TTTAAAACAC ACCCTAAAAT CTCTGAACTC TTTGGTGCTG CAGCTTGAGG TATTCTATCA CCCAATTGTT |
| Length | 1900 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 13060993.. 13062877 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G48250.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | [BIR6][Buthionine sulfoximine-insensitive roots 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.79583 |
Ahg928372 | NHL domain-containing protein |
| 13.0767 |
Ahg488299 | polyribonucleotide nucleotidyltransferase, putative |
| 14.8997 |
Ahg482921 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| 16.0312 |
Ahg470297 | |
| 17.1172 |
Ahg904629 | pumilio 24 |
| 26.8328 |
Ahg325494 | translocon at the outer membrane of chloroplasts 64-V |
| 29.7321 |
Ahg924637 | DEA(D/H)-box RNA helicase family protein |
| 31.8591 |
Ahg327675 | pentatricopeptide (PPR) repeat-containing protein |
| 35.8887 |
Ahg473074 | |
| 36.8782 |
Ahg479811 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|