Detail



ID : Ahg488423

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488423|fgenesh2_kg.6__1557__AT5G15790.1
Sequence
AGCAACAACG CCCACCCACT TTCACACCAA CTTCATCACA CAACTCTCCT CCTTCACTTT TTCCTTGAAT CTCTCTTCTC GCTGACGAAT TAACAATAAA GAACCTTCTC TTTTTTCCGT CGAGTCCGAT CAAAATCGAA AACCCGTTTA GTTCTTCATC AAAAGGTGAA ATTTGAGAGA ATGAATGAAG CAGATTGTTG GTGAAATGTT TGGAGACTTT CTGTAGATCG AAACCTCTGA TTTAGTATTC CTAGAGAAGG TTAAAGGAGT TTCCTAAAAG TTTCAAATCA AAGCAATTTT GACTCCAAGT TCTTGAGTTA GAATTAACAT TTCAAGAAAG AAGAGAAGGA GATGGGCTGT GTTTCTTCTT GCTTTCGGGT CGAAGACTTT GAGGATTACC CGAATCCAAG TAGTTCTTCT GTTAACAGAA CCTGCCCATG CCCGAGATGT CTCATTAATA ACTTCCTTAA CCTGTATATC TCTTTATTCA GAAGAGGCGA AACCCGCTCT CTCCCGTCCT CTTTACAGGC TACTAATGTA TCAATAGCTT CATCTACTTC GTATGATAAC TTTATGTCTA ATACATTCCA TTCTACTCCA AGGCCTCTGC CTTATGATAC TGATCCAAGA TACTTCCGGT CAAGGCGTGA TTCCCTTGTC TCAAGACGCG ATAAGGGTTC AAGTCATTCT CATGAGGAAG CTGAGCCCTT AAGAAGCGAT GCTGATGTGG ATTCTGAGTC TTTCTCAGTG GAAGGAAGCA AATGGACTAA TAAGCTTATT ATCTCTGGTG AAGATTCCAA AGAAGAGTTT TCTAAATCCT CTCGGAGGAT TCTTCAGTCA AGGACAATGG CTACTGGTAA TGAAGGTGTG TATATAACTT CTGATGATGA AGATGTCTGT CCAACGTGTC TTGAAGAATA CACATCAGAG AACCCGAAGA TTGTTACAAA TTGTTCTCAC CATTTCCACC TCAGTTGCAT TTATGAATGG ATGGAGAGAA GTGAAAACTG CCCTGTTTGT GGAAAGGTGA TGGAGTTCAA CGAAACACCG TAACCTGTTA CCATTGATCC CGTCTTGTAC TGCCTAAACC GAAGCTGGGG AGATTGACAA GGCAGCAGAG AGATGTGAAT ATTTTTAACA ATGGGGAATG AGGAAATGTC TCTCTGCACG TTTGGCTAAT GGAGTTCTGA GGAAACCCTC TAGAGAGAAA ACAGCAGCAG CAGCAAAACA CATGCTCACA GGAATCTGAC ATGTTTCTTA GGATTTGCCT ATGGGGCAGT GTTTTGATCA AGGCATGAAA CTTTTTACAT CATTTTGTAT GATTTATGAA TATATATGTG ATGCTTGTTT ACATTGGGTA TCACATTGTA ACCCAAA 
Length1377
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6166638.. 6169490
Download Sequence
A.thaliana
AGI-codeAT5G15790.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.225 Ahg480460 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
31.9844 Ahg470299 RAD3-like DNA-binding helicase protein
32.619 Ahg476492 Auxin efflux carrier family protein
53.2541 Ahg324031 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
57.1314 Ahg478421 methyl esterase 17
66.4078 Ahg356183 Plant protein of unknown function (DUF827)
81.5475 Ahg480982 basic pentacysteine 4
90.5649 Ahg918735 Leucine carboxyl methyltransferase
96.4676 Ahg494911
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression