Detail



ID : Ahg488716

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488716|fgenesh2_kg.6__1850__AT5G18410.2
Sequence
GAAGAAAGCT TCCAACTTTG CGAAATTTTT GGTTCAGACA GAGTAGCAGC GAAATTCTCG ATCTCTGTCC GTAAAGAATC AGAACAAAAG CCGAATCAAT CGGCTTGAAG TAGTAGAGCA GCTCTCTCCT CTCCTCTCCA TTGTGGTTGG GTAAGAAACA CAATGGCAGT TCCTGTTGAG GAAGCAATTG CAGCTCTTTC CACATTCTCC TTAGAGGATG AGCAACCAGA AGTCCAAGGA CCGGCTGTGA TGGTTTCAGC TGAAAGAGCA GCAACGGATA GTCCCATCGA GTATAGTGAT GTTGCAGCAT ATCGTTTGTC TCTATCAGAA GACACAAAAG CTCTAAACCA GCTGAATACA CTTATACAAG AAGGAAAAGA GATGGCGTCA ATTCTATACA CATATAGAAG TTGTGTCAAA GCACTTCCTC AGCTTCCCGA ATCTATGAAG CATAGTCAAG CGGATTTGTA TCTAGAAACA TATCAAGTTT TGGACTTAGA AATGAGTCGT TTACGCGAAA TTCAGAGATG GCAATCGTCG GCTTCAGCTA AATTAGCTGC TGACATGCAG CGGTTTTCCA GACCTGAACG GCGCATCAAT GGCCCCACAG TCACACATCT TTGGTCAATG CTAAAGTTGC TTGACGTCTT GGTTCAGCTG GATCATCTTA AAAATGCTAA AGCTAGTATT CCTAATGATT TCTCTTGGTA TAAGAGAACA TTCACTCAAG TCAGTGCGCA GTGGCAAGAT ACAGATACAA TGAGAGAAGA GTTAGATGAC TTACAGATTT TCCTAAGCAC AAGATGGGCT ATTTTACTCA ACCTGCATGT TGAGATGTTC CGTGTAAACA ATGTGGAAGA TATTCTCCAA GTTCTCATAG TCTTCATCGT TGAGTCTCTG GAGTTGGATT TTGCACTACT TTTTCCTGAG CGTTATATTC TTCTCCGAGT TTTACCTGTT CTTGTTGTCT TAGCAACACC ATCTGAGAAA GATACCGAGG CTTTATACAA GAGGGTAAAA CTCAACAGAT TGATAAACAT TTTCAAGAAT GATCCTGTCA TTCCTGCGTT TCCAGATCTC CATCTTTCCC CTGCTGCAAT TTTGAAAGAG TTGTCGGTAT ACTTTCAAAA GTTTTCATCA CAGACTCGCC TTCTGACTCT TCCAGCACCT CATGAGCTCC CTCCACGCGA AGCTCTAGAA TATCCTTTAA GATTTCCACT ACACTATTTG ATAGTCAATC ATATTGGAGC TCTCCGTGCC GAGCACGACG ATTTTACAAT CCGATTTGCT TCATCCATGA ATCAGTTATT GCTGTTGAAG TCAAACGATG GAGCATATAC TGAATGGTGC AGAGAGGTCA AAGGAAATAT GTACGATATG GTTGTTGAAG GTTTCCAACT GTTAAGTAGA TGGACAGCAC GCATTTGGGA GCAATGTGCT TGGAAATTCT CTCGCCCATG TAGGGATGCA GGAGAGACTC CGGAAGCCTC CGGATCATAT TCTGATTACG AGAAGGTGGT GAGGTTCAAT TATACTGCAG AAGAAAGGAA AGCCTTGGTA GAACTTGTTG GCTATATAAA GAGTGTAGGA TCGATGCTGC AGCGCTGTGA CACATTAGTT GCAGATGCTT TATGGGAGAC AATACATGCC GAAGTTCAAG ATTTTGTACA GAACACGTTA GCCACAATGT TGCGTACCAC CTTCCGAAAG AAGAAAGATC TCTCAAGGAT TCTTTCTGAT ATGCGGACAC TTTCAGCTGA CTGGATGGCA AATACCAGGC CCGAACATGA GATGCCATCT TCACAACATG GAAATGATGA AAGCAGAGGG AATTTCTTTT ATCCGAGGCC AGTTGCCCCA ACAGCAGCAC AGGTGCATTG CTTGCAGTTT TTGATATATG AGGTTGTCTC TGGTGGAAAT CTGAGGAGGC CAGGGGGATT CTTTGGAAAT AATGGCTCTG AGATTCCTGT TAATGACTTA AAGCAATTAG AAACGTTCTT CTACAAGCTC AGCTTTTTCT TGCACATATT GGATTACTCG GCAAGTATTG GAATTTTGAC TGATCTGGGG TTCCTCTGGT TTAGAGAATT TTACCTGGAG TCTTCACGTG TTATTCAGTT CCCGATTGAG TGTTCACTAC CATGGATGCT GATAGACTAC ATTCTGGAAG CTCAGAATTC AGGCCTTCTT GAGAGTGTTC TGCTGCCTTT TGACATTTAT AATGACTCAG CTCAACAAGC TCTGGTTGTT CTGAGGCAGA GATTCCTCTA TGATGAAATT GAAGCTGAGG TGGACCATGG TTTTGATATA TTTGTTTCAA GGCTCTCGGA GTCTATATTC ACATATTACA AGAGTTGGTC AGCAAGTGAG CTTCTTGATC CATCATTTCT CTTTGCCTTG GACAATGGTG AAAAGTTCTC CATCCAGCCT GTGAGATTTA CTGCGTTATT TAAGATGACA AAAGTAAAGA TACTTGGTAG AACAATCAAT TTAAGAAGTT TGATCTCTCA AAGGATGAAT AAAATCTTTA GAGAGAATCT GGAGTTTCTT TTTGACCGTT TTGAGTCCCA GGACCTATGT GCTGTAGTGG AATTGGAGAA ACTGATAGAT ATCCTAAAGC ACTCGCATGA ATTGCTTTCA CAAGATCTTT CCATAGATCC TTTCAGTCTC ATGTTGAATG AAATGCAAGA AAATATATCT CTTGTCTCAT TTTCAAGTCG ACTTGCTACA CAGATTTGGT CAGAGATGCA GAGTGATTTC CTACCAAACT TCATTCTTTG CAATACCACA CAACGATTTG TCCGTTCATC GAAAGTTCCT CCTACTCAGA AACCATCAGT GCCTTCTGCT AAGCCTAGTT TCTATTGTGG CACTCAAGAC TTAAATGCAG CGCATCAAAG TTTTGCACGA TTGCATAGTG GATTTTTCGG GATACCACAT TTATTTTCCA TAGTTAAACT TCTTGGATCT AGATCACTGC CTTGGCTTAT AAGAGCTTTG CTGGACCATA TATCAAATAA GATAACAACA CTTGAGCCAA TGATCTCTGG ATTGCAAGAA GCACTGCCCA AGTCTATTGG ATTGCTTTCT TTTGATGGTG GTGTTACAGG TTGTATGAAG CTTATACGAG AGCAACTAAA CTGGGGCACT AAGTCAGAAC TCAAGTCAGA AGTTCTACGA GGAATAAAGG AAATTGGAAG TGTGATATAT ACAATGGGAC TTCTCGATAT CGTATTGAGA GAGGTCGACA CAAAGCGTTT CATGCAAACA GCTCCATGGT TGGGATTAAT CCCGGGTGCT GAAGGACAGA TAGTTAATGC TCAAGACGGT GAAAGCCCTC TTGTCAATCT CCTAAAGTCA GCAACTTCTG CAGTTGTGTC AAGTCCTGGT TGTCTTAATC CAGCTGCATT CTACACCATG TCCAAACAGG CAGAAGCTGC AGATCTATTG TATAAGGCAA ATATGAACGG TGGAAGCGTT CTTGAATACA CACTTGCATT CACAAGTGCG TCGCTCGACA AATATTGTAG TAAATGGAGT GCTCCTCCAA AGACGGGCTT CATTGATATT ACAACTTCAA AGGATTTTTA CCGTATATAC GGTGGTCTTC AGATTGGATA TCTGGAGGAG ATAACAGCTC CACAGTCAGC TCAACATGAA GTCCTCGGTG ATTCGATTGC TTGGGGTGGT TGCACCATTA TTTACTTGCT CGGCCAGCAA CTTCACTTTG AGTTGTTTGA TTTCTCGTAT CAAGTACTCA ATGTCTCTGA GGTTGAAACT GTCTCTGCTT CACATACTCA CAGGAATCCT CAAATCCATC AGGGGTGGGA AGGTTTGTTG GAAGGGATGA AGAAAGCTCG GAGGCTGAAC AACCATGTCT TCTCCATGCT TAAAGCTCGT TGTCCTCTTG AAGACAAAAC GGCTTGTGCC ATCAAACAGA GTGGCGCACC GCTGCCACGT GTCAGGTTTG AGAATACTGT GTCTGCTTTC GAGACTCTAC CTCAGAAAGG TACCGTTGGC TGATGCAATT TGTACAAGAA CCAACCAGAG TGTTTATGCA CTAGAACCAA AGTGTTTCCT TCTTTCTTGC TTAACAAGTG ACCTGGAAAA TCGTTTGTAT ATCAATGGAG TTTTTTTTGT TGTTACTTAA GATAAACGCA TA 
Length4162
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7291261.. 7298804
Download Sequence
A.thaliana
AGI-codeAT5G18410.1
Descriptiontranscription activators
TAIR curator summarydistorted trichomes and exhibits a diffuse actin cytoskeleton
Alias[ATSRA1][KLK][PIR][PIR121][PIRP][SRA1][KLUNKER][PIROGI][PIROGI 121]
Gene coexpression
MR
MR Locus Description
16.6733 Ahg473597 2-oxoacid dehydrogenases acyltransferase family protein
21.587 Ahg488793 Heavy metal transport/detoxification superfamily protein
22.5389 Ahg921218
23.3238 Ahg493252 guanyl-nucleotide exchange factors;GTPase binding;GTP binding
25.2982 Ahg471307 CYTOCHROME P450 51G1
26.5518 Ahg321185 Outer arm dynein light chain 1 protein
33.0454 Ahg492007 NAD(P)-binding Rossmann-fold superfamily protein
35.4965 Ahg321151 ARM repeat superfamily protein
35.609 Ahg935405 ALG6, ALG8 glycosyltransferase family
38.1838 Ahg924045 calpain-type cysteine protease family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression