| Annotation |
|---|
| Description | jgi|Araly1|493252|fgenesh2_kg.7__2685__AT4G16340.1 |
| Sequence |
GTTGGACTTA TGGTTCCAGC TCGACTTTTG CTTCCTGTCG AGTAATCTTC ACTTTTTCCT TTTCCCCAAC TGCTTCCTCT CACGGATCTC TTCCTCTCTG CGTAAAGACA AAGATTCATC CTCCTCTTCC TCTACCTCCC CCACTCAGAT CTACTATGTC CTTTTTCCTT TTCTAGGTTT TCACAAATCC CCAATTCTCT CTACATTGTA TTAGATCTAT CTCAATGGAG AACAACAATC TTGGTCTTCG ATTTCGTAAG ATACCTCGTC AGCCTGTTGC TCTCCCTAAG CTCGATCCTT TGCTTGATGA GAATCTGGAA CAATGGCCGC ATTTGAATCA ATTGGTTCAA TGCTATGGCA CTGAATGGGT TAAAGATGTT AATAAATATG GTCACTATGA AAATATTCGA CCTGATACTT TCCAGACTCA GATTTTTGAA GGACCTGATA CTGATACCGA GACTGAAATC CGTCTTGCTA GTGCTAGGAG TGCAACTATT GAGGAGGATG TAGCTAGTAT ATCCGGGAGG CCGTTTTCTG ATTCTGGATC CTCCAAGCAC TTTGGGCAAC CTCCTTTACC TGCTTATGAA CCAGCTTTTG ACTGGGAAAA TGAAAGAGCT ATGATATTTG GCCAGAGAAC TCCTGAATCT CCTGCAGCAA GCTATTCCAG TGGATTGAAG ATCTCCGTCA GAGTTTTGTC TCTAGCTTTT CAGTCTGGCT TAGTTGAACC ATTTTTTGGC TCGATTGCAT TGTACAATCA AGAGAGGAAG GAGAAACTCT CTGAGGATTT TTATTTCCAT ATTTTGCCGA CGGAAATGCA GGATGCTAAA AATTCATCTG AAAATCGTGG AGTATTTTAT CTAGATGCCC CATCAGCATC AGTTTGCCTG CTTATTCAAT TAGAAAAAAC AGCAACAGAG GAGGGAGGCG TTACAACATC TGTCTATTCC CGTAAAGAGC CTGTGCACTT AACTGAGAGG GAAAAGCAAA AGTTGCAGGT CTGGTCTCGC ATTATGCCTT ACCGAGAGTC TTTTGCTTGG GCAGTTGTTC CGCTTTTTGA TAATAATGTC ACCACAAACA CTGGTGAATC TGCTTCCCCT AGCAGTCCTC TTGCTCCTAG TATGACCGCG TCAAGTTCCC ATGATGGTGT TTATGAACCC ATTGCAAAGA TCACATCAGA TGGAAAGCAA GGTTATTCAG GTGGAAGTTC TGTCGTAGTT GAAATATCTA ATTTAAACAA AGTTAAAGAG AGCTACTCTG AAGAGTCAAT TCAGGACCCC AAACGGAAGG TTCACAAACC TGTTAAAGGG GTTCTAAGAC TGGAAATTGA GAAACATCGG AATGGACATG GAGACTTTGA AGATCTATCT GAGAATGGAA GTATCATAAA TGACTCCCTT GATCCGACTG ACCGCCTCAG TGACCTGACA CTTATGAAGT GTCCCAGTTC TGGTTCTGGT GGACCCCGTA ATGGCTGTTC GAAGTGGAAT TCAGAGGATG CAAAGGATGT TTCAAGAAAC CTAACAAGTT CAAGTGGGAC TCCTGACTTA AATTGTTATC ATGCTTTTGA TTTCTGCTCT ACGACAAGAA ACGAGCCTTT TCTACATCTC TTCCATTGCC TTTATGTGTA TCCTGTAGCT GTTACTTTAA GTCGGAAGAG GAATCCCTTT ATCCGTGTAG AATTGAGAAA GGATGACACT GATGTCCGAA AACAACCACT CGAGGCAATA TATCCAAGAG AGCCTGGTGT TTCACTCCAG AAGTGGGTTC ATACACAGGT TGCTGTTGGT GCTAGGGCTG CTAGCTACCA TGATGAAATT AAGGTCTCTC TTCCTGCCAC ATGGACGCCA TCACATCATC TGTTATTCAC TTTTTTTCAT GTTGATCTCC AGACAAAGCT TGAAGCTCCA AGACCAGTAG TTGTTGGATA TGCATCACTT CCATTATCTA CCTATATCCA CTCACGGTCT GATATTTCTC TACCAGTAAT GAGAGAACTG GTTCCCCACT ATCTTCAGGA AACCACCAAG GAGAGGTTGG ATTATTTGGA AGATGGCAAG AATATTTTTA AGTTGCGACT GAGACTTTGT TCGTCTCTTT ATCCCACCAA TGAACGTGTC AGGGATTTCT GTCTAGAGTA TGATAGACAT ACCCTCCGGA CAAGCCCTCC CTGGGGTTCA GAACTGTTGC AGGCAATAAA CAGTTTGAAG CACGTTGATT CTACTGCCTT GCTTCAGTTT CTTTACCCAA TTCTTAATAT GCTCCTTCAT CTTATTGGCA ATGGTGGAGA AACTCTTCAG GTTGCAGCAT TCAGAGCCAT GGTGGATATT TTAACTCGGG TGCAGCAGGT GTCGTTTGAT GATGCTGACC GAAATCGATT TCTGGTCACC TATGTTGATT ATTCTTTTGA TGATTTTGGA GGCAATCAAC CACCAGTTTA TCCTGGATTA GCAACTGTAT GGGGAAGTTT AGCTAGAAGC AAGGCCAAAG GTTACCGGGT TGGACCTGTA TATGACGATG TATTATCAAT GGCGTGGTTT TTCCTCGAGT TGATTGTTAA ATCGATGGCA TTGGAGCAGG CACGTCTTTA TGATCACAAT CTACCTTCAG GCGAGGATGT TCCACCCATG CAGCTCAAAG AAAGTGTTTT CCGATGTATC ATGCAATTGT TTGATTGTCT TTTAACTGAA GTTCATGAAC GTTGTAAAAA GGGCCTAAGC TTGGCGAAAC GTCTGAACAG CAGTTTGGCC TTCTTCTGTT ATGATCTTTT ATATATAATT GAGCCCTGCC AGGTTTATGA ACTGGTATCG TTATACATGG ACAAGTTTTC TGGTGTTTGT CAATCTGTTC TACACGAATG CAAGCTCACG TTTTTGCAAA TTATCTCCGA CCATGATCTT TTTGTAGAAA TGCCTGGTAG AGACCCATCA GACAGGAACT ATTTATCATC CATATTAATA CAGGAGTTAT TTCTTTCCCT GGATCATGAT GAGCTGCCTC TGCGGGCGAA GGGAGCAAGA ATTTTAGTGA TCCTCTTATG CAAGCATGAA TTTGATGCAC GGTACCAGAA AGCTGAAGAT AAGCTGTATA TTGCACAACT ATATTTTCCA TTTGTCGGGC AGATTTTAGA TGAAATGCCC GTCTTTTATA ACCTAAATGC TACTGAAAAG CGTGAGGTTT TAATTGGCGT GCTGCAAATT GTTCGTAATC TGGATGACAC ATCACTTGTC AAGGCATGGC AGCAGAGCAT CGCTCGTACT AGATTGTATT TCAAACTCAT GGAAGAATGC CTCATACTTT TCGAGCACAA GAAGGCTGCT GACAGCATCC TCGGGGGCAA CAATTCTCGT GGTCCTGTTA GTGAAGGAGC TGGATCACCA AAGTACTCCG AGCGACTTTC TCCTGCTATC AACAATTATC TGTCAGAGGC TTCTCGCCAA GAAGTCAGGC TAGAGGGAAC ACCTGACAAT GGGTACCTGT GGCAGAGAGT TAATTCTCAG TTGGCCTCCC CTAGCCAACC TTATTCTCTA AGAGAAGCTT TAGCTCAAGC ACAATCTTCG CGGATTGGAG CTTCAGCTCA GGCACTAAGA GAATCGCTGC ACCCTATTTT GAGGCAAAAA CTGGAACTTT GGGAAGAGAA TGTAAGTGCC ACTGTTAGCC TCCAGGTTTT GGAGATCACT GAAATTTTTT CATCAATGGT AGCCTCTCAC AATATTGCAA CGGACTATGG AAAATTGGAC TGCATTACTA CAATATTGAC GAGTTTCTTC TCCCGGAACC AGTCATTAGC CTTCTGGAAA GCCTTCTTTC CAATTTTCAA CAGAATCTTT GATCTTCATG GGGCTACACT GATGGCCAGG GAAAACGATC GCTTCTTAAA ACAGATAGCC TTCCATCTTC TCCGGCTTGC TGTTTACCGC AATGACAGTG TCAGGAAAAG GGCTGTCATT GGTCTTCAAA TACTAGTTAA GAGCTCGCTA TACTTTATGC AGACTGCTAG GCTGAGGGCT TTGCTGACCA TTACACTGTC AGAACTCATG TCGGATGTCC AAGTGACTCA TATGAAAACA GATAATACAT TAGAAGAGAG TGGAGAAGCA CGTCGGCTTC AACAGTCATT AAGCGAAATG GCTGATGAAG CTAAGAGTGT CGATTTGTTG AGGGAGTGTG GTCTTCCTGA TGATACACTG TTGGTAATTC CCGAGAAATT TACAGAGAAT CGCTGGTCAT GGGCTGAAGT CAAACATCTT TCTGATAGCC TTGTTCTTGC TCTTGATGCC AGCCTCGGGC ATGCCCTTTT GGGATCTGTG ATGGCTATGG ATCGATATGC TGCAGCAGAG AGCTTCTACA AACTTGGAAT GGCATTTGCT CCTGTTCCGG ATCTTCACAT AATGTGGTTG CTGCATCTAT GTGATGCCCA CCAGGAAATG CAGTCTTGGG CTGAAGCTGC ACAGTGTGCT GTGGCGGTTG CAGGTGTGAT AATGCAGGCC TTGGTGGCTA GAAATGATGG TGTGTGGAGC AAGGATCATG TGTCTGCCTT GCGTAAGATT TGCCCGATGG TAAGTGGCGA GTTTACAACA GAGGCATCTG CAGCTGAAGT CGAGGGTTAT GGTGCTTCAA AGCTAACAGT TGACTCCGCC GTCAAGTACC TACAGCTTGC TAATAAGCTT TTCTCTCAAG CTGAGCTCTA CCATTTTTGT GCAAGCATTT TGGAACTTGT TATTCCAGTT TACAAGAGCA GGAAGGCTTA TGGGCAGTTG GCTAAGTGTC ACACTTTACT TACTAATATA TATGAGTCCA TTCTTGACCA AGAATCAAAC CCAATCCCAT TTATTGATGC TACATATTAC CGGGTGGGAT TTTACGGGGA AAAGTTTGGG AAGTTGGACA GAAAAGAATA TGTATACCGT GAACCACGAG ATGTGCGGCT AGGGGATATA ATGGAAAAGC TGAGCCATAT CTATGAATCA AGAATGGACA GCAACCATAT TCTGCACATT ATACCAGATT CGAGACAAGT GAAAGCAGAA GAATTGCAGG CAGGAGTGTG CTACCTGCAA ATTACAGCTG TTGATGCAGT GATGGAAGAT GAGGATCTTG GGAGCAGAAG AGAGAGAATA TTTTCTCTTT CGACTGGAAG TGTTCGAGCA CGAGTGTTTG ATCGCTTCTT GTTTGACACA CCATTTACAA AAAATGGTAA GACCCAAGGT GGATTAGAAG ATCAATGGAA GAGAAGAACA GTGCTGCAGA CTGAGGGTTC ATTCCCTGCG CTTGTGAATA GGCTGTTGGT TACCAAGTCT GAATCCCTTG AATTCTCGCC AGTGGAGAAT GCGATTGGAA TGATTGAAAC GCGGACAACT GCTCTGAGAA ATGAGCTAGA GGAGCCTCGT AGCTCGGATG GGGATCACCT ACCACGGCTT CAAAGTCTGC AGAGGATTCT CCAAGGAAGT GTTGCAGTGC AGGTGAACAG TGGGGTGTTG AGCGTGTGCA CAGCATTCTT ATCAGGAGAG CCTGCAACTA GATTGCGTTC GCAGGAACTG CAGCAACTGA TCGCGGCACT GCTTGAATTC ATGGCGGTTT GTAAGCGAGC CATTAGGGTT CACTTTAGAT TAATCGGAGA AGAAGATCAG GAATTCCATA CTCAGCTTGT CAATGGATTT CAGTCTCTCA CCGCTGAACT CTCCCATTAC ATCCCTGCTA TCTTGTCCGA ACTTTAGTGT ATCTTTGTCA GTTTTTGCTA CAAATTTTGT GCTTTTTTCT TCCACCATTT GGCTTGGGTA TATGTTTGTC ATTTCTGTAA TTCTTAGTTT AATGACAACA AATGAGAGAA ATTTTTTTAA TGACAATTGT TTGACTTCTA ATTCAGAAGC TTATGTTATA TTCGATCGTG GAAATGAGCT CCCAGCTTCA AACACAAGCC ACTCAACTAT TTAGGATGCC TCCGACATCT CA |
| Length | 5952 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 11364931.. 11377714 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G16340.1 |
| Description | guanyl-nucleotide exchange factors;GTPase binding;GTP binding |
| TAIR curator summary | mutant has Seedling lethal; Cotyledon, leaf-shape, trichome defects; Putative Cytoskeletal Protein |
| Alias | [SPK1][SPIKE1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.14143 |
Ahg903252 | FtsH extracellular protease family |
| 10.583 |
Ahg494787 | Chaperone DnaJ-domain superfamily protein |
| 15 |
Ahg324042 | |
| 21.2132 |
Ahg325786 | glucan synthase-like 12 |
| 22.9347 |
Ahg484328 | Amidase family protein |
| 23.0651 |
Ahg324170 | hydroxyproline-rich glycoprotein family protein |
| 23.3238 |
Ahg488716 | transcription activators |
| 25.2785 |
Ahg930502 | BLISTER |
| 39.8748 |
Ahg943901 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 42.8486 |
Ahg491408 | homeobox gene 8 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|