Detail



ID : Ahg488727

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488727|fgenesh2_kg.6__1861__AT5G18475.1
Sequence
CGGTGGTGCC GTCAATCCAA TAAGGTAAGA GATACAATGC GTTTCACAAC TTCGATAATC AATGAGCATC GCCGGTTCTC ATCATCGTCA AGATCATGGG TATCTCCCAT TTGCTTCTCG GAGAAGAAGA AGAAGAAGCT AGACCCACCA CCTGAATCCT CAATCTCAAC TATGGAAACA AACCCCAAAA CCAAGTTTAT CTCTCACGAA TCTACTGTCA GTTTGATGAA ACGAGAGAGA GATCCTCAAC GTGCGCTTGA TATCTTCAAC AAAGCTTCTC AGCAGAAAGG TTTTAACCAT AACAATGCTA CATACTCTGT TCTTTTGGAT AACCTCGTTA GGCACAAGAA GTTTCTAGCT GTTGATGCTA TTCTTCATCA GATGAAGTAC GAGACTTGCA GGTTCCAGGA AAGTTTGTTT CTTAACCTGA TGAGACATTT CTCCAGGTTT GATTTGCATG ATAAAGTTAT GGAGATGTTT AACTTGATTC AAGTGATTGC TCGTGTGAAG CCTTCTCTCA ATGCCATTAG TACTTGTTTG AATCTCCTTA TTGATTCAGG GGAGGTTGAT TTGGCCCGGA AACTACTCTT GTATGCCAAA CACAATCTTG GATTGCAGCC AAATACTTGC ATTTTCAATA TTTTAGTGAA GCACCACTGC AAGAATGGGG ATATCGATTC TGCATTTCGA GTTGTGGAGG AGATGAAAAG ATCTGGGATT TCGTATCCCA ATTCGATCAC TTACTCAACC CTTATGGACT GTCTGTTTGC ACACTCGAGG TCCAAAGAAG CGGTGGAATT GTTTGAGGAT ATGATCTCGA AAAGAGGGAT TTCACCGGAC CCTGTGATTT TCAACGTTAT GATCAATGGA TTCTGTCGTT CAGGGGAAGT CGAAAGAGCC AAGATGATTT TAGACTTCAT GAAGAAGAAT GGATGCAACC CAAACGTATA CAATTACTCG GCTCTAATGA ATGGGTTCTG TAAAGAGGGA AAGATTCAGG AAGCTAAACA AGTCTTTGAC GAGGTGAAGA AAACCGGGTT GAAACTCGAC ACAGTTGGTT ATACCACATT GATGAACTGC TTGTGTAGAA ATGGTGAAAT TGATGAGGCT ATGAAGTTAC TTGGAGAGAT GAAAGCATCC AGATGCAGGG CTGATGCATT AACTTATAAT GTAATACTCA GGGGCTTGTC CAGCGAAGGA AGATCAGAGG AAGCTCTTCA GATGCTGGAT CAATGGGGAT GTGAAGGAGT TCATCTTAAC AAAGGTAGTT ATAGGATCAT ACTGAACGCG TTGTGTTGTA ATGGCGAGCT CGAGAAAGCG GTAAAGTTTA TGAGTGTGAT GTCGAAGAGA GGGATTTGGC CTCACCATGC GACTTGGAAT GAATTGGTGG TTCGGCTTTG TGAATCCGGG AATACAGAAA TTGGGGTTCG AGTTCTGATT GGATTTCTTG GAATAGGTCT CCTACCAGCG CCCAAATCTT GGGGAGCTGT GGTTGAATCA ATTTGCAAAG AGAGGAAGTT GGTGCATGTC TTTGAACAGC TTGATTCTTT AGTTTCTTGA TAAAACCCTT TATTGAT 
Length1577
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7335687.. 7337353
Download Sequence
A.thaliana
AGI-codeAT5G18475.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
36.318 Ahg474789 embryo defective 3012
47.697 Ahg945001 Dihydropterin pyrophosphokinase / Dihydropteroate synthase
52.4214 Ahg472799 Phosphoribulokinase / Uridine kinase family
66.5432 Ahg496765 homeobox protein 5
71.4143 Ahg900664
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression