| Annotation |
|---|
| Description | jgi|Araly1|474789|fgenesh2_kg.1__4743__AT5G40480.1 |
| Sequence |
CTACTTCTTC AATCTACTCT CCTTTGTTTG CGTTGATGTA GCAAAACAAA GAACAAAAAA ATGGTTCGTT TCTCGTTCTG CTTCTTCTTT CTCCTTCTCT TGCTATCGGC TGGAGAAATT TCATCGCAAT TAGGTTCTGG TCCACACATT ACCGATGTTA ACATACTCTT ACCTCCGAAG ATGAAGAACC CAGTTGATTA TCGCCTTCAA GGAAGTGATG GCTGCTTCAA ATGGTCATGG GATCATCATG ACATTCTCTC AGTTATACCT GAGTTTAATT CGAGCAGTCG TTGCTCAACC AGCGCGCGTC TGAGATCGAT TTCTCCGTAT AGTGGTAGAA AGGAGACTGC AGTTTATGGC ACTGATATAC AGACCGGGAT GGTGATTCGC TGCAAGGTGT TTATTGACAA CTTCTCACGG ATTCAGATTT TTCATAATTC TATCAAGCTT GATCTTGATG GACTTTCCTT GCTTAGAGTC CGCGCTTTTG ATAATGAAGA AAACGAATTC TCCTCACTGG TGGGTCTACA ATTCATGTGG AAGCTGATGC CTGAAAGTGG TGGATCAACG CATCACCTTG CTCATGTGCC TTTGAAGGAA TCTCCGTTGA CTGACTGTGG AGGACTGTGT GGCTACTTGG ATATCCAGAA AAAGCTTGCA GATAGTGGTG TATTTGCAGA TTTGTTTGTC GTGAAGGGAA CCAAAATTGG ACATGAGAAG GTTTCAGTAC ATCTGCTTGA GGATCCTCTG ACCCATATAT CCGATGAAAT AGTACTAACT GTGGCAGAGG CCATGTCTCT TGAACCTCGT TCACCAGTCT ATGTCCTGAT GGGAGCTTCT TTTGGTTACA CGTTAAAGGT CATGCGTGAA AATGTTCCTC AAGCCGTGCA TCTACCATCA CCACATCATA GATGGTCTGT GTTGAACACT TCTGTTGCTC AAGTGGATTC TTTGATAGGT CTGACTAAAG GGTTAAGCTT GGGGTTAACA ACTGTTGTTG TTGAGGATAC CCGGGTCGCT GGCCACATTC AAGGATCATC TATTAATGTT GTCACTCCAG ATACTCTTAT CTTGTACATA TCACCTTGGT CAATGTCAGG GGATCTTATT ACAGAATCGA AACCTTTTCC ATCATCTATG CATTGGTATG TGGTGTCTGG TCGTCAATAT CTAATTCAAA TGAAGATTTT CTCTGGAAGA CCTGATGCAC ATGAAATCTA TATAACTGAG ACGGATGACA TAAAACTGTA TGGAAAAGAA TCAGATTATT GGAAAATCTT CTCACTGCCA GATGAACTTT CCTCTGAATA TGGTCAGCAA AATTCTAGAA TTTTGAACGC AATGTCACCA GGGTTAGGAG AGCTAACAGC TACATTGACC TACTTCAGTG GGCATCAGGA ATCAAAAGAA GTTCTCAAAA TTGTCCAAGA AATTATGGTT TGTGAGAAAG TGCAGTTCAC ATTGAACAGT AAAGATGACA CACCTAAGAT TCTACTCCCT TGGACCCCTG CTGTTTATCA GGAGATGGAG CTAATTGTTA CAGGAGGTTG TGCAAAAGCA TCGAGTGACT ACAAGTGGTT TACTTCAGAT ATGAGCATTT TTTCGGTGTC AGCTTATGGA ATTATCCAGG CAAAGAGGCC TGGAATAGCC ACTGTGAAGG TGGTGTCAAC TTTTGATTCA CAAAATTTTG ATGAGGTTAT CGTTGAAGTT TCCATTCCAT CCTCTATGGT TATGTTGCAA AACTTCCCAG TAGAGACAGT TGTTGGATCA CACCTGAAAG CTGCTGTCAC AATGAAGGCT TCAAATGGTG CCTCTTTCTC TAGATGTGAT GCTTTTAATT CATTGATAAA GTGGAAGACG GGGAGTGACT CTTTTGTTAT TGTTAATGCG ACATCTGAGA TGATGATGTT GGACGAACTA AGAAGCATGG ACTCCAGCCC TCCTTGTTCG CAGGCTTCTA TATATACTTC ATCTCCTGGC CGCACAGTAC TCCAAGCAAC TTTGGCAAAA GAGTTCCATT ATTTTGATAA GTCGTTGAGT GAATCAATAG ATTTGAAAGC AACTTTAAGT ATCGGGGCCT ATCTGCCACT TTCTGTCAGA CAAGATAGCG ACGGGAATCA TCACGGTGGA TATTTGTTTG ATAAGGCACA AGAAGAAACT GATTTTGGTG TTAGTAAGCT ATATCTTGTA CCTGGGACAT ATGTTGACGT TATGCTTCTG GGGGGACCTG AAAGGTGGGA TGACAATGTT GAGTTCACCG AGACTGTGAA GACATTGTAT GAAGATGAGG AGGATCTTAC AAGCAGAGTT AACGTGCATC ATGAGTTTGA CCGCCATGCT AACATATATA GAATTTCGTG CCAGAAGCTT GGCTCCTATA AACTGGTCTT CTTGCGTGGG TATCTGGTGG GTATGGACCA TCCTGTACCT GCAGTTGCAG AAGCTTTATT GTCTGTTCAT TGCAGCTTCC CATCCTCTGT TGTGCTCATT GTTGATGAAC CTGTTAACAA GCTTGATGTG ATTAGAGCTG CTAGTCAAGC TGACAGGGCA CCAGGACGAC TTCGTGTAAC TCCTGTGACT GTGGCAAATG GGCAGATAAT TCGTGTGGCT GCTGTTGGTA TTAGCGAGTT TGGAGAAGCT TTTTCAAACT CCTCAACTCT TTCTCTCAGG TGGGAACTGA CCAGTTGCAA CAATTTGGCA TACTGGGACG ATGATTATAA CTCAAAAATG ACAAAGTCTA GCCGGGAGAG ATTTCTGGCT CTTCGCAACG AATCAGGATT GTGCACTGTC CGAGCCACCG TTTCTGGTAT TGATTATTCA TACTCAACTC CGCTTCCACA AGGTTCTCAA AGTACTCTCA CTGATGCTGT ACGCTTACAG TTGGTTTCCA CACTAAGAGT CACACCAGAG TTCAACCTGG TCTTTTTCAA TCCTAATGCC AAGGTAAATT TGTCAATGAC TGGAGGGAGC TGTTTGTGGG AAGCAGTTGT GAATAATTCT CGTGTAGCAG AAGTTATTCG ACCCCCATCT GGCCTGCAAT GCTCGCAAAT GATGCTATCT CCAAAAGGGT TGGGGACTAC ACTCGTGACA GTATACGACA TTGGGGTTTC TTCTCCACTT TCAGCACTTG CGTTGATTAA AGTTGCAGAT GTGGACTGGA TAAAGATTGC ATCTGGGGAT GAGACAAGTA TAATGGAAGG AAGTTCACAC TCCATTGATC TCTTGACTGG CATTGACGAT GGGATGACCT TTGATTCTTC CCAGTACCCA CTTATGGACA TTATGGTGCA TATTGAGGAT GATCTCGTGG AGCATGTCAC TGTTGATGAT AATTCACTTT CGGTCGGTGA ACACGTGGGA ACTTCCTCTT TTAAAATTGC TGCTAGACGA CTGGGAATCA CAACCCTATA TGTCAGCGCA AGACAACAAT CAGGAGATAA AGTACTAAGC CAGACTATTA AAGTCGAAGT TTATTCCCCT CCAAGACTTC ACCCACAAGG AATATTTCTT GTTCCCGGTG CTTCTTATGT GCTCACTGTT GTAGGAGGCC CGACCATGAA TGTTTCTGTT GACTACACCA CTGTGGATAG CGAAGTGGCA AAGGTTGAAA AATCAGGACG CCTATACGCA ACATCACCCG GCAACACGAC AATCTATGCA ACGATTTACG GGAGTGAAGG TACTGTAATT TGTCAGGCAA TTGGCAATGC TGAAGTAGGA CTTCCTGCTG CTGCGATGCT GGTAGCTCAA AGTGACACTG TGGCCGTTGG TCATGAAATG CCTACGTCCC CATTATTTCC TGAGGGAGAC CTTTTGTCTT TTTATGAGCT CTGCAGTGCA TACAAGTGGA CTATTGAAGA TGAGAAGGTG TTAATTTTCA TTGCATCATC CATCAATGTG GAAGAGAATG CTGCTGGCTT TATCAATGTC GTCCAAGGAA GATCAGCTGG CAAAACCAGA ATCACAATTG CCTTCTCATG TGATTTCGTG TCTCCTGGCT TGTACTCTGA ATCTAGAACA TATGAAGCGT CAATGATTTT ATCTGTTGTG CCTGATCTCC CTCTTTCGCT TGGCGCTCCT ATGACTTGGG TTCTTCCGCC TTTTTATACA TCATCTGGTC TATTACCTTC ATCTCTAGAG CCACAGAAGC ATAGGGATGG CCAAAGTCAC AGAGGCAATA GAGTCTATTC CATATTGAAA GACTGTAGCT CTCCGGCTGA TTTTGAACGA GATACCATAT CAATTAATGG TGGAAGTGTC AAAACAACAG ATAGCAACAA TGTTGCATGT ATTCAAGCCA AAGACCGCAC AAGTGGAAGG ATTGAGATTG CTGCTTGTGT GAGGGTTGCA GAGGTTGCTC AAATAAGAAT GAAGAGTGAG GGGATCCCGT TCCACGTGAT AGATCTTGCT GTCGGCGGTG AACTTGAACT TCCAATAAAT TACTATGACA CTTTAGGAAT CCCTTTTCTC GAAGCACATG GTGTTATTAC ATACAATGTT GAAACTAATC ATCGGGATGT TGTGTATGTT AAGACTGTCA ATGACCAACC AAGTGCCTAC ATTAAGGGAA TAAAACATGG CAAAGCTCTC ATTCGGGTTT CCATTGGCGG CAAAAATCTC AGGAAATCAG ACTACGTTCT GGTTTCAGTT GGGGCTCATA TCTTTCCTCA AAACCCAGTC ATTCACACTG GAAATTTGTT AAATTTCAGC ATAGCAGGGG CTGATCATGA AGTCTCTGGT CAATGGGTTA CATCAAACAG AAGTGTCCTA TCCGTCAATG TGGCATCTGG CCAAGCTAAA GCGATCAGCC AAGGCTCAAC TCATGGTAAT ATCAATTTAT CTTTCTTGCT CTGGTTCTTC AACTTACCAT GTGATGAAAT GTTTTCTACA GGCCAAAGTG TAGAAATTGA TGTCTCATAT GAGACGGGCG AGTCCCTAGT AGCTTCGTCT AAAGATGGAT ACTCTTTTTT GTTCAAGATA CTATGGTGCG TTTTGGTGTG GGCTATATCA GGGATCATCT CGATGAAAGT GATAGGGTCT AGAATTGCAA CAAACAGTGG AACTGCAGGA CCGGGAACAC CAGAAAGAAG AAGCGGTGCA GTAATATACC ATGAGGAATC TCCAAGAACA CCATCACCGT TTATGGAGTA TGTGAAGAGA ACAGTGGATG AAACTCCCTA TTACAGAAGA GAAGGAAGAA GAAGGTTTAA TCCTCAAAAC ACTATGTAG |
| Length | 5229 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 30334614.. 30344085 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G40480.1 |
| Description | embryo defective 3012 |
| TAIR curator summary | |
| Alias | [EMB3012][embryo defective 3012] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.2111 |
Ahg490357 | ARM repeat superfamily protein |
| 7.93725 |
Ahg322444 | |
| 9.21954 |
Ahg497488 | eukaryotic translation initiation factor 2 |
| 12.2474 |
Ahg926563 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 20.8327 |
Ahg483366 | Ribosomal protein L1p/L10e family |
| 35.327 |
Ahg923384 | presequence protease 2 |
| 36.318 |
Ahg488727 | Pentatricopeptide repeat (PPR) superfamily protein |
| 36.8239 |
Ahg497180 | Protein of unknown function (DUF2361) |
| 40.1995 |
Ahg888078 | Protein of unknown function (DUF3414) |
| 42.2493 |
Ahg927989 | peroxin-12 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|