Detail



ID : Ahg488797

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488797|fgenesh2_kg.6__1931__AT5G19130.1
Sequence
GGTTCGAATC TCCCGAAATT GATCGGAGAT CTGTGGATCA TGGCGGCGGT GAAACGGGAA AATGAAGAGG AGGTGAAGAC CGATGATGGA TCTCCTAAAA TCAAACCGAG ACCAATCGTT CGGCTAGGAA TCTTTCTCAT CGCTCACAGT CCCATCTTCA GTGTGGTTTT CTCTGCTGCT GGGGTTTTGG CGCTGCTGCT TTTGCCGCTA CTGGCAAAGA ACACTTACAT CTCCGAGAAT GCTCTAATGC CAGGCTCTGC ACGGTCTATG CTCTCTAATC AGGATGTTTC TGATGGAAGC AAACTGGTGA AAGACATAAA GAATTTTAGG TTGAATCATG AAGGCCAGGG TGTCGAAGTC CAGAAGCTTA TTGGAACATA CATGTCAGAA ATGGGTGCAG AAGTTTCTTA TCAAAAGTTC CATCCTGAAG GGAATCAATT TCACCCTCTG CACTTTTTCT CCGGTCCTGA TTCATATACA TTGCTGGAGA ATGTCAGTTG TGCTTCTTAT GGGGTCAATG TTGCGGGGAT TATAAGAGCC CCTCGTGGTG ATGGAAAAGA GTCTATTGTG CTGGTTACTC CCTATGATTT TATAAATGGT GGAGATTATG AGAGTTTGTC TTTAGGAATT GTCAGCTCAC TTTTTTCCTT GCTCTCTAGA GTTACCTGGC TTTCCAAAGA CATAATATGG CTTGTCGCTG ATTCTCGTTA TGGAGACTAT AGGCCTGTTG CTGCGTGGTT AACTGAATAC CACTCACCTT CATTCAAGGT CTCGGATCTT CTGAAGTGTA ACGAGCTAAA TACAGCTGAT AACTTCAGAC GAGCTGGAAC AGTGGCTGCT GCTTTGGTTT TGAAGGTTGA TGGTAGAAGT GACAGGTTTG AGGACACACT AAGTATCTAT GCAGAGGCAT CTAATGGGCA GATGCCAAAT CTCGATCTCA TCAATGTTGT AAATTACTTA GCGGTCCACA GGCAGGGTTT TTATGTCAAG GTGGAGAAGG TTGTATCTTT ACTTTCCTCT AGTTGGCTAA AGTTTTTTGG GGAAATATTT GAAGCTGTTG GGAAATTGGG GCATACGTTA AATCCGGACT GGAATTTTGG TATCCCAGCC GCAGACTATC TTGAAGGCAG TGCTACCCTT GCAAGTTCCC TGTACTCCCA GGCCCTTGGT ATACCAACTG GTCCTCATGG AGCTTTCCGC GATTATCAAG TTGATGCAAT TACTTTGAAA GTTTCACCTA GATTTCCTCC TGACAGTAAG ACAAGACAAC ACGAATTCTT TCTACGAGGT GCCCGGTTAC TGGAAGGAAC TATAAGATCA GTGAACAACC TCCTCGAGAA GTTCCATCAA TCGTTTTTCC TTTACCTGTT AACTTCGCCA AGCAAATTTA TCTCTGTAGG AGTCTACATG ATTGCCTTTG CTCTTCTTGT AGCCCCTCTT CCAATGGTCG CAGCCTCTTT ATACATTGAC GGATGTAAAG CTCTTACCAA TTCCACTCAT AACCCTGCCG AAAACTTCAA GTCCTGGAAA TGGCTAGATG CAGCCAAACA GGTCTTTGCT TTGCACTTGT TGGGTTTCAT CGTCACACTG CTTCCTTATT TTATCTGTCA ACTACCGGGC CAACATTCTC CAAGAAACCG CTCCATTATG TGGGGTACTA CCTCTTCGTC GCTTCTCCTT ATAACCTTTG TCACAATCCC GGGTTGCTCT CCGTTCTCCT CTCGACTCCA TCGAAACAAC TGGGCTGTCT TGAAATCAGT GACCATCGCA GCTGCCTTCA TCGGTCTATG CCTCATGTCC ATAATCAATT TCGCCACCGC AGAGATTGGA GCATTGCTAC TAGTGCCAAC GTGTCTAATG GCTCAGCCTA TAAAACCAGC TCTGAGATCC AGAAGCATTA AGAGCCTGTT GGGTGCGCTT TGCAGCTTGG TGTTGGTGAC CATCGGGTTC CCGGTCATGT TTTTCGCAAT CTCAAAAGGG TTGCTTGGAG AAGGGCTCGT AGGTTTGAGT CTTGGAGGAG AGTTTTGGAC ATGGTTAGAG TCGCTTTGGG CGTGGAAGAG TGCGACATAT CTATACATAG GTATGATTCA TCTTCCTTGC TGGCTCCTTT GCCTCTGTAT CTTGTTTCAT CCTTCTTAAT TCTTATTTTA CGCCCCAATC CCCATACAAA GTTACTTTTT ATTTCCTTTA CTTCGGCGAA AGTTGTCCAC AGTCCAACAC TCTTGAAATT TGTCATGTTT TCTAGTTGTC GCATGGTAAT TAGCAATTAG AGGTCTGATG TATCGTTAGA AAACTTTAAA AGTCGTATGA ATGAGTGAAG TTTTTGTATT GATTTTTAGT TTT 
Length2343
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7678298.. 7681480
Download Sequence
A.thaliana
AGI-codeAT5G19130.1
DescriptionGPI transamidase component family protein / Gaa1-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg482091 ARM repeat superfamily protein
5.74456 Ahg494728 THO complex, subunit 5
5.91608 Ahg482750 ARF-GAP domain 7
6.63325 Ahg480227 RNA helicase, ATP-dependent, SK12/DOB1 protein
9.16515 Ahg483227 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
14.8997 Ahg892422 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
15.8745 Ahg311407 Beige/BEACH domain ;WD domain, G-beta repeat protein
18.1108 Ahg942140 Flavin-binding monooxygenase family protein
20 Ahg936446 uridine kinase-like 2
20.9762 Ahg494737 Zinc finger C-x8-C-x5-C-x3-H type family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression