| Annotation |
|---|
| Description | jgi|Araly1|489733|fgenesh2_kg.6__2867__AT4G08180.3 |
| Sequence |
AAAAATAAAA AAGCTTTGGC CTCTCCGGTG ACTCTTCTTC TTCTGCTACC GAACTTTTCG CTTTCTTCTC TGACCAATTT TCAACAACCT CTCTTCTTCT TCTTTCTCAA TTCTCTCAAT CCTCAAATCC TCTCTGCCAT GAACGCTACT TTCTTCCTCC TCTCCACCAC CGTGAACCAC CGCACAATCA TCGGATCCAA CGGAATCGAT TTCTCATCTT AGTCGTCTCT CACCACATGC ATCCCTTCTG TTGCGTTACC ACTGTCTCCG ATCACTCTCC TTCGATGCCT CCTTTACCGG AACCACAACC GCCTCTACCG ATACACGCCG CTGCTTCCTC CGCAACGCCT TTTGGTTCCG CGAGATCCGA GCCGATTATT TCTCGATCTG CTTCTCAGAG TTATAATCAT CATTCAGGTC AATTGAATAA CAATCAGAAT CTTATTCATA GTCTTTCGTT TAATCACCAG AGTGATGTCG CCAATCGATT GGGGCAACGC GTTTTAGCTT TGCCGGCGGC GGTTAGAGAA CCTCCGGTTG ATGTTAAGAT TAACGATATC GTTGGGAATG GAATTGCTGG GATTTTGTAT AAGTGGGTGA ATTATGGTAG AGGATGGAGA CCTAGGTGGT TTGTTTTGCA AGATGGTGTG CTTTCGTATT ATAAGATTCA TGGACCTGAT AAGATCTTTG TTAGTCCTGA AACTGAAAAA GGATCTAAAG TGATTGGAGA TGAGTCTGCT CGTATGATCT CTAGGCATCA TCGCCGTGGC GGAAGCAGTA GTAGTTGCCA GCTTCGTCGC AAGCCATTTG GAGAAGTCCA TCTTAAGGTT TCTTCAGTTA GGGAGAGTAG ATCAGATGAT AAGAGGTTTT CCATTTTTAC TGGCACCAAG AGGCTTCACT TGCGTGCAGA GACGCGAGAG GACCGAACGA CTTGGGTTGA GGCTTTACAA GCTGTTAAAG ATATGTTTCC AAGGATGTCT AATAGTGAAT TGATGGCTCC GACTAACAAT TTGGCCATGT CGACGGAGAA GCTTAGGCTA AGGTTGATTG AGGAAGGAGT TAGTGAGTTA GCTATTCAGG ACTGTGAGCA AATTATGAAG TCTGAGTTCT CAGCACTTCA GAGCCAGCTG GTGCTTCTCA AGCAGAAGCA GTGGCTTCTC ATTGATACTC TTAGGCAGTT GGAGACAGAA AAGGTAGATC TGGAGAACAC AGTTGTAGAT GAGAGTCAAA GACAGGCTGA TAATGGATGT TCCAGTGAAT TAAGACATGA GAAGTTCAGT GAAGGGACTG CCACTGAATC TGATGATGAT AATGAACGCG GTGATGCCGC CGAGGAGGAA TTTGATGAGG AAGAAAATAC CTTTTTTGAT ACACGTGATT TTCTTTCTTC AAGTTCTTTC AAGAGTAGTG GTTCTGGTTT TCGTACTTCA TCATTTTCTT CCGATGAAGA TGGCTTCGAG TCAGAAGATG ATATTGATCC TTCCATCAAG TCTATTGGAT GCAACTATCC TCGCGTCAAA AGGAGGAAGA ATTTACCTGA TCCGGTTGAA AAAGAGAAAA GTGTTAGCCT TTGGTCAATG ATCAAAGACA ATATAGGCAA GGATCTAACA AAAGTCTGTC TTCCTGTTTA CTTCAACGAG CCACTATCTT CTTTACAGAA ATGTTTTGAG GATTTGGAAT ATTCATACCT TCTTGACCGT GCATTTGAAT ATGGCAAAAG GGGAAATAGC CTCATGAGGA TTCTCAATGT AGCTGCTTTT GCTGTATCTG GGTATGCATC AACCGAAGGA AGAATCTGCA AACCTTTTAA TCCATTGTTA GGTGAAACAT ACGAGGCAGA CTATCCAGAC AAAGGCCTTC GATTTTTTTC AGAAAAGGTC AGTCATCATC CTATGGTTGT CGCATGCCAT TGTGATGGCA CGGGATGGAA ATTCTGGGGA GACAGCAATC TTAGGAGCAA ATTCTGGGGT CGATCTATTC AGCTTGATCC TGTTGGTGTA TTGACTTTGC AATTTGATGA TGGAGAAATC CTTCAGTGGA GTAAGGTGAC TACATCAATA TACAATCTCA TACTTGGTAA ACTGTACTGT GATCACTACG GTACAATGCG TATTGAGGGC AGTGCTGAAT ACTCATGTAA ACTTAAATTC AAGGAGCAGT CCATCATAGA CCGAAATCCT CATCAGGTTC ATGGTATAGT TCAAGACAAG AGTGGGAAGA CAGTGGCAAC GATGTTTGGG AAATGGGATG AGAGCATGCA CTTTGTGACG GGTGATTGTT CTGGGAAGGG GAAACAGAGT GAAGCTATGT CAGGAGCTCA ACTTCTTTGG AAACGGAGCA AACCTCCTGG AAACGCAACA AAGTATAATC TAACACGTTT TGCAATCACG TTGAATGAGC TTACGCCTGG GCTTAAGGAG AGCCTTCCAC CAACGGATTC AAGGCTGCGA CCGGACCAGA GGTATCTCGA GAACGGAGAG TTTGAAATGG CCAACACAGA GAAGTTGCGG CTGGAACAGC GACAACGTCA GGCTAGGAAG ATGCAGGAGA GAGGATGGAA GCCGAGGTGG TTCATGAAGG AGAAAGGTAG CGAGTCATAC CGATACAAAG GAGGTTACTG GGAAGCCCGA GAGGATGGAT TATGGGTAGA CTGTCCAGAT ATCTTCGGCC ATATCGATTC CGATCAACAA ATGATAGAGT AAAGAGAAAT TATAAGCCAC ATCGATTCTT AAATCACGAA GTATTAAATT CCTCATATCA TCCTTTCTAA TTACGTTTTG GTTTCTTCTA TTATTTTCCT TTTTTTTTCA TCTCATTATT CTTTACTCGC CATTTCACCT TACAGGACAT TTACCTTTAG TCTTTTTTTT CTTTTCTTTG TATATCATGA AATAGTTCGC CTCATACGCA AATTTGTCCA ATCCTTGTAA GTGGAAGAAT GTGCTCTTAA TCATACATGG CTATATTGAA TAAGCAAAAG GAAGAAAGTT ACATATGTG |
| Length | 2999 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 17184084.. 17188399 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G08180.1 |
| Description | OSBP(oxysterol binding protein)-related protein 1C |
| TAIR curator summary | |
| Alias | [ORP1C][OSBP(oxysterol binding protein)-related protein 1C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.38083 |
Ahg909961 | |
| 10.583 |
Ahg485198 | Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 |
| 12.2474 |
Ahg488886 | PRLI-interacting factor, putative |
| 13.0767 |
Ahg478704 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 14.5258 |
Ahg470988 | soybean gene regulated by cold-2 |
| 16.5227 |
Ahg476793 | DNA-binding bromodomain-containing protein |
| 24.2899 |
Ahg484508 | global transcription factor group E8 |
| 25.2982 |
Ahg481235 | nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding |
| 26.3249 |
Ahg933499 | pentatricopeptide (PPR) repeat-containing protein |
| 28.1425 |
Ahg483567 | DNA-binding bromodomain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|