Detail



ID : Ahg488953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488953|fgenesh2_kg.6__2087__AT5G20480.1
Sequence
ATCTTTTTAT AAGCGACATG AAGCTGTCTT TTCCACTTGC TTTCAATGCT CTCATGTTGC TTCTTCAAGT TTGCTGCGTG GTCTTTGCTC AAGCCAGGTT TTCTAATGAG ACTGACATGA AAGTTTTGCT TGAGTTCAAG TCTCAAGTTT CTGAAAACAA GAGAGAGGTC TTGGCCTCAT GGAATCACTC CTCCCCATTA TGCAATTGGA TTGGAGTCAT ATGTGGCCGC AGGCAAGAAA GAGTTATAAG TCTGAACCTC GGAGGATTCA AGTTAACCGG TGTGATCTCA CCCTCCATTG GTAATCTCTC CTTTCTCAGG TTTCTTAATC TTGGAGACAA CTCTTTTGGA AGTACCATCC CTCAAGAGGT GGGAATGCTA TTTAGGCTTC AGTACTTGAA CATGAGCTAT AATCTTCTCC AAGGAAGGAT TCCGCCTAGT CTTTCTAATT GCTCTAGACT GTCGACTGTT GATTTATCGT CAAACCAGCT TGGACATGGC GTTCCTTCAG AACTAGGTTC ACTTTCTAAG CTGGCCATTC TGGATCTTAG TAAAAACAAC CTTACAGGAA ATTTTCCTGC ATCTTTTGGA AACTTGACGT CACTCCAGAA GCTTGACTTT GCATATAACC AGATGGGAGG TGAGATTCCA GACGAAGTAG CTAGATTGAC TCATATGGTG TTTTTTCAAA TAGCACTGAA TAGTTTTTCA GGTGGTTTTC CTCCTGCATT GTACAACATC TCCTCTCTTG AGTTTCTATC TCTAGCTGAC AATAGCTTTT CGGGTAACCT TAGGGCTGAT TTTGGTGATC TTCTACCAAG TCTAAGATGG CTTCTTTTGG GATCAAATCA GTTCACTGGA GCTATTCCCA TAACACTTGC CAATATCTCA AGCCTTGAAT GGTTTGATAT CTCATCTAAT TACCTGACTG GAAGTATCCC TTTGAGCTTT GGAAAGTTAC GTAATCTGTG GTGGTTAGGA ATTCGTAATA ACTCTCTTGG ATATAACTCG TCCAGTGGTC TTGAATTTAT TGGTGCTTTG GCGAACTGCA CTCAATTAGA GTACTTAGAT GTTGGTTACA ATAGACTTGG AGGTGAGCTG CCTGCCTCCA TGGCCAATCT GTCCACTAAA TTGACTAGTC TGTTCCTTGG ACAAAATCTT ATCTCTGGAA CCATTCCTTA CGACATCGGG AATCTTATAA GCCTGCAAGA ACTCAGTTTG GAAACAAATA AGTTGTCTGG AGAACTTCCA GTCTCTTTCG GGAAGCTTTT GAATTTGCAG GTGGTGGATC TCTATTCAAA TGCAATATCG GGGGAAATAC CATCTTATTT TGGCAACATG ACTCGGTTGC AGAAGCTCCA TTTGAATAGC AATAGTTTCC ACGGAAGAAT CCCTCAGAGT CTTGGACGTT GTCAATACTT GCTAGACCTG TGGATTGATA CAAATAGGTT GAATGGGACT ATACCTCGGG AAATACTGCA AATTCCGTCC CTCGCTTACA TAGATTTGTC AAACAATTTC TTGACCGGCC ATTTTCCAGA AGAAGTTGGA AAGTTGGAAC TTCTTGTTGG ACTAGGTGCT TCGTACAACA AATTATCAGG ACAGATCCCA CAAGCTATAG GGGGTTGTCT CTCGATGGAA TTTCTTTATA TGCAAGGAAA TTCGTTTGAC GGAGCCATTC CAGATATAAG TCGGTTGGTA AGCCTAACGA ATGTTGACTT CTCCAACAAC AATCTCTCTG GCCGGATACC TCGATATCTG GCCAATCTAC CTTTGTTGCG AAATCTGAAT CTTTCTATGA ACAATTTTGA GGGAAGCGTG CCAACAACAG GAGTGTTCCG AAATGCTACA GCAGTTTCTG TTTTTGGTAA CAAAAATATA TGCGGAGGCA TCAGAGAAAT GCAACTAAAG CCATGCATTG TAGAAGCATC TCCAAGGAAG AGAAAGCCTT TCTCACTTAG AAAGAAAGTT TTCAGTGGTA TTGGTATAGG TATAGCTTCG CTTTTGTTAA TCATAATTGT GGCTTCTCTG TGTTGGTTCA TGAAGAGGAG AAAGAAGAAC AATGCCAGTG ATGGTAACCC ATCTGATTCT ACTACTTTGG GGATGTTCCA TGAGAAGGTA AGTTATGATG AGCTTCATAG TGCAACAAGT GGCTTCTCTT CAACCAATCT GATTGGGTCA GGCAATTTCG GTAATGTGTT TAAAGGATTG CTTGGCCATG AGAATAGACT CGTTGCGGTT AAAGTTCTGA ACCTCCTAAA GCATGGAGCA ACTAAAAGCT TTATGTCGGA ATGTGAAACC TTCAAGGGTA TACGACATCG TAACCTTGTA AAACTGATAA CGGTCTGTTC AAGTCTCGAT TCCGAGGGAA ATGAGTTCAG AGCTCTGGTC TATGAGTTCA TGCCAAAAGG AAGTCTGGAT ATGTGGCTGC AGCCAGAAGA TCAGGAAAGG GCAAACGAGC ACTCGAGATC CTTAACACTT GCAGAGAAAC TCAACATAGC AATAGATGTG GCTTCAGCTT TGGAGTATCT GCACGTTCAT TGTCATGACC CTGTAGCTCA CTGTGATATT AAGCCAAGCA ACGTTCTTCT AGACGATGAT CTGACTGCTC ATGTTAGTGA CTTTGGTTTG GCTCGGCTCC TCTATAAATA CGATCGAGAA TCCTTTCTAA ACCAGTTTAG TTCTGCCGGT GTCAGAGGCA CCATTGGCTA TACCGCACCA GAATATGGAA TGGGAGGCCA ACCATCAATA CAAGGAGATG TGTACAGCTT TGGAATTCTA CTTTTGGAGA TGTTCACAGG AAAGAAACCG ACAGGCGAAC CATTTGCAGG CGATTACAAC CTCCACTGCT ACACACAGTC GGTATTGTCT GGTTGCACGA GTAGTGGAGG CAGCAACGCC ATTGATGAAT GGTTGAGACT GGTTTTGCAG GTGGGGATAA AGTGTTCTGA AGAATATCCA AGGGATAGGA TGAGAATTGC TGAAGTGGTA CGAGAATTAA TCTCAATCAG AACTAAATTC TTCAGTGCCA AGACGACTAT TACAGAGAGT CCTCGAGATG CTCCGCAAAG TTCTCCTCAG GAATGGATGT TAGATGCGGA CTTGCATACT GTGTAGACCC TTCTCAACTA CTTAGGATGG GCACACAGTA AAAGATCGAA ACAGAACATT GTTGGGGAGA GACTACTAAT TATATATAAA GAACATTTTA AAATCTATCT CTGCTGTAGC CTTTCTTTTG TTGTTGTGGG TGATAATGAT TATGACCACA TAGATATGGT CGTTGAATAT CCTTTTTCA 
Length3299
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8248747.. 8251951
Download Sequence
A.thaliana
AGI-codeAT5G20480.1
DescriptionEF-TU receptor
TAIR curator summaryEncodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.
Alias[EFR][EF-TU receptor]
Gene coexpression
MR
MR Locus Description
60.6135 Ahg493357 baruol synthase 1
89.2412 Ahg334832 HCO3- transporter family
94.1807 Ahg916653
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression