| Annotation |
|---|
| Description | jgi|Araly1|489076|fgenesh2_kg.6__2210__AT5G22260.1 |
| Sequence |
ATCATAATAT ATATCCAAAT CTATCATATT CCCTCTTGTC AAGATCAAAC CAAAGTTCTG ATTCCATGGC GAATCTGATT CGAACAGATC ATCAGCAGCA TATTCCAAAA AAGAGGAAGA GAGGGGAAAG TAGGGTTTTC AGGCTGAAGA CGTTCGGAGA GTCAGGACAT CCAGCTGAGT TGAACGAGTT GTCCTTTCGA GACAACCTCG CGAAACTACT TGAGTTTGGT CACTTTGAGA GCTCCGGTCT CATGGGAAGT TGGTCTTTTC AGCTCGAGAT TCAACGCCAC CCAAATCCTC TTTATGTGCT TCTCTTTGTA GTAGAAGAGC CCATCGAAGC CTCTCTCAAC CTCCGTTGCA ACCATTGCCA ATATGTTGGT TGGGGAAACC AAATGATATG CAACAAGAAG TACCATTTCG TGATCCCCTC AAAGGAAACG ATGGCCGCCT TTCTAAAACT GGAAGGTGGA GGCTACATTT TTCCTGAAAA GGAAAGTCTC TCCCATTTGG TGGAGCTTCA AGGCCATGTC CTTCACGGCT TGTTTCACTC TAACGGATTT GGTCACTTGC TCTCTGTCAA CGGCATTGAA ACCGGCTCCG ACATAACCGG TCACCAAGTC ATGGATTTGT GGGACCGGCT CTGCACCGGT TTAAAGGCCA GGAAAATAGG GTTGAATGAT GCATCGCACA AAAAAGGAAT GGAGCTGAGG CTGCTGCATG GGGTAGCAAA AGGAGAGCCA TGGTTCGGTC GTTGGGGCTA CCGGTTTGGG TCAGGGACAT ACGGAGTGAC TCAAAAGATT TACGAGAAGG CACTTGAATC GGTCCGTAAC ATACCCTTGT GCTTGCTTAA CCATCACCTA ACCAGCCTTA ACCGAGAAAC TCCATTCCTC TTGTCAAAGT ACCAAAGTTT ATCCACTGAG CCATTGATCA CTCTCAGTGA CCTCTTCAGG TTCATGCTTC ATCTCCATTC GCGTCTTCCA AGAGATAACT ACATGAATAA CTCCCGAAAC CAAATCATTT CCATTGATAG TAGCAACTGC AGATGGTCTC AAAAACGGAT CCAAATGGCT ATCAAAGTGG TCATAGAGTC ATTAAAAAGA GTCGAATACC GATGGATATC GAGGCAAGAA GTGAGGGACG CAGCTAGAAA TTACATCGGG GACACAGGTT TGCTTGATTT CGTTTTGAAG TCGCTCGGGA ACCAGGTGGT CGGAAACTAT TTGGTCCGAC GTAGTCTAAA TCCGGTGAAG AAAGTGCTAG AGTATTGCTT GGAGGACATA TCAAATTTGT TACCAAGTAG TAACAATGAA CTCATAACCC TTCAAAATCA AAACTCAATG GGGAAGATGG CGACGAACGG TCACAATAAG ATCACAAGAG GTCAAGTGAT GAAAGACATG TTTTATTTTT ACAAACACAT TCTCATGGAC TACAAGGGAG TTTTAGGCCC CATAGGAGGC ATATTGAACC AAATCGGAAT GGCTTCTAGA GCAATCCTCG ATGCTAAGTA CTTCATCAAA GAGTACCACT ACATTAGGGA TACATCGGCC AAAACATTAC ATTTAGATCG AGGGAACAAA TTAGGAATAT TCTGCACGAT CGCATGGAAA TGTCATCATC ATAATAACGA GATTAAAATT CCTCCACAAG AATGCATAGT GGTTAAGAAA GATGCAACAT TGAGTGAAGT GTATGGAGAG GCAGAAAGAG TGTTTAGAGA GATCTATTGG GAACTAAGAG ACGTCGTGGT GCAGTCACTG GCAGATGGTC AAAGAGAGAT CACAAGGGTC GATGAAATGG CCATGATGAA TTGGAATAAA GGATTGGTGT TAGAAGGGAA TGTAGGAATG ATGATGAACA TTGAAGTGAT GAAATGTTAT GAAGATGATG ATAAAAAGAA GGATAAGAGA ATTGAGTGTG AGTGTGGAGC AAAGGAAGAA GATGGAGAGA GAATGGTGTG TTGTGATATA TATGAAGTAT GGCAACACAC AAGGTGTGTT GGCGTTCAAC ACAATGAGGA AGTTCCTCGC ATTTTTCTTT GTCAAAGTTG TGACCAACAT CTTATTCCTC TCTCTTTTTT ACCTTAAACC ATTCATTCAT AATACATAAA TTATACTCCT CCATC |
| Length | 2125 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8807872.. 8809887 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G22260.1 |
| Description | RING/FYVE/PHD zinc finger superfamily protein |
| TAIR curator summary | Sporophytic factor controlling anther and pollen development. Mutants fail to make functional pollen;pollen degeneration occurs after microspore release and the tapetum also appears abnormally vacuolated. Similar to PHD-finger motif transcription factors. |
| Alias | [MS1][male sterility 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.6382 |
Ahg943595 | copper ion binding;electron carriers |
| 19.9249 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 23.622 |
Ahg481664 | transposable element gene |
| 27.1477 |
Ahg952263 | copper ion binding;electron carriers |
| 30.4959 |
Ahg942781 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 31.5595 |
Ahg950383 | Auxin efflux carrier family protein |
| 34.641 |
Ahg350644 | Lateral organ boundaries (LOB) domain family protein |
| 35.4965 |
Ahg920704 | beta-tonoplast intrinsic protein |
| 44.9444 |
Ahg919851 | Protein kinase superfamily protein |
| 45.288 |
Ahg931324 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|