Detail



ID : Ahg919851

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919851|scaffold_101132.1
Sequence
AGCAAATAAG GTGAAGACAA ATGGACAAAG TCCAGCAACA AGCAGATTTA ATCGGTAAGA CGATATCTCC GTTTGTAGCT TCACAACCAA CAAATGTCGG AGGATTAACT GATCAGAAAA TCATCGGCGG TTCTGAGACG ACACAACCTC CAGCCACCTC ACCTCCTTCT CCTCCATCCC CCGACAGTGG CGGCGCACAA GCATCTCCCC CGCCGGCAAC AGCTGCTCAA CCACCACCGA ATCAGCCTCC TAATACAACT CCACCTCCAA CACCTCCTTC TTCCCCTCCA CCTTCTATAA CTCCACCTCC TTCACCTCCT CAGCCTCAAC CTCCGCCTCA ATCCACCCCA ACTGGAGATT CTCCGGTGGT GGTTCCTTTT CCAAAGCCTC AATTACCTCC TCCTTCGCTT CTTCCTCCTC CCTCCTTAGT TAATCAGCTA CCGGATCCAA GAACCAATGA TGATAACATA CTTCAACCCA TCAACAACCC TATTTCTCCT CCGTCTCCGC CTTCTACTCC CTTTTCGCCA CCGTCTACGG AAAATTCCGG CAGTCAAGGG TCTCCTCCGT TGTCATCTTT ATTGCCTCCG TTGCTTCCCC TAAGCCCTAA TTCTCCTGGA AACCCTTCAC AACCCTTGGA CTCACCCCCG GGAGGAGGAT CAAATCGTGT ACCCTCGTCG TCTTCTTCCC CGTCTCCTCC TTCCCTCTCC GGCTCCAATA ACCATTCCGG AGGCTCTAAT AGACATAATG CCAATAATAA CGGAAATGAT GGCAATGGCC AACAAAGTAA TGAGTCTAAT TACACCGAGA AGACAATGAT TGGTATTGGG ATCGCAGGTG TGTTGGCTGT AATTTTCATC GCTGCCGTTT TCTTCGTTAG GAGGAAACAA AAGAAAGGTT CTTCTTCTCC GCGCTCTAAC CAGTATTTGC CACCGGCTAA TGTCTCTGTA AATACAGAGG GATTCATCCA TTACAGACAG AAACCCGGAA ATGGGAACAG CTCGGCGCAG AACTCTTCAC CGGATACTAA CAGTCTTGGG AACCCAAAAC ATGGTAGAGG AACCCCTGAC TCCGCAGTAA TAGGGACTTC AAAGATCCTT TTCACCTACG AAGAGCTAAG CCAGATAACG GAAGGATTTT GCAAAAGCTT TGTGGTAGGA GAAGGCGGGT TCGGGTGTGT TTACAAGGGC ATCCTTTTCG AGGGAAAGCC AGTAGCGATC AAGCAGCTAA AGTCGGTCAG CGCAGAAGGA TATAGAGAGT TCAAAGCTGA AGTAGAGATC ATAAGCAGAG TGCATCATAG GCACTTGGTG TCTCTTGTGG GTTATTGCAT CTCTGAACAA CACAGATTTC TCATCTATGA GTTTGTCCCC AACAATACTT TGGATTACCA TTTGCATGGC AAAAACTTAC CGGTTTTGGA ATGGACTAGA AGAGTCAGGA TTGCAATAGG CGCAGCCAAA GGACTTGCTT ATCTACATGA AGATTGTCAT CCGAAGATTA TCCATAGGGA CATCAAATCG TCAAATATTC TGTTGGATGA TGAATTCGAA GCTCAGGTTG CAGATTTTGG ACTCGCAAGA CTGAACGATA CTGCACAGTC ACACATATCA ACGCGTGTCA TGGGCACATT TGGGTATTTA GCACCAGAAT ATGCGTCAAG CGGAAAGCTA ACGGATAGAT CAGATGTGTT TTCATTTGGA GTTGTGCTTC TCGAACTCAT CACTGGTCGC AAACCTGTTG ATACCTCTCA ACCTTTGGGT GAAGAAAGTC TCGTCGAATG GGCACGTCCA CGGCTAATCG AGGCCATTGA AAAAGGTGAC ATCAGCGAAG TAGTGGATCC ACGGCTAGAA AATGATTACG TCGAAGGTGA AGTCTATAGA ATGATCGAAA CGGCAGCGTC TTGTGTTAGA CATTCAGCTC TTAAACGACC TCGTATGGTT CAGGTTGTAA GAGCTCTGGA CACGAGAGAT GACTTGTCGG ATCTGACAAA CGGAGTTAAA GTGGGTCAAA GTACGGTCTA CGACTCGGGT CAATACAGTA ATGAGATTCG AATTTTCAGA CGAGCCTCTG AAGATTCCTC GGATCTTGGT ACTAATACTG GCTACTACCC AAGCCAAGAC TACGCTACGA GCCATGAATC TGAGAGCCGA GCCTTCAACA CAAGTCACCG GAACCACTAA TTAAACTCAA ACTTGTTGTG 
Length2200
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3966928.. 3970265
Download Sequence
A.thaliana
AGI-codeAT1G10620.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[AtPERK11][PERK11][proline-rich extensin-like receptor kinase 11]
Gene coexpression
MR
MR Locus Description
21.4942 Ahg480275
24.7386 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
40.2989 Ahg895999
44.9444 Ahg489076 RING/FYVE/PHD zinc finger superfamily protein
46.2169 Ahg946730
46.8615 Ahg483920 Signal transduction histidine kinase
47.3075 Ahg921700 ENTH/VHS/GAT family protein
59.4559 Ahg481664 transposable element gene
64.1872 Ahg319046 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
67.6905 Ahg330954 cytochrome P450, family 71, subfamily A, polypeptide 28
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression