Detail



ID : Ahg489241

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489241|fgenesh2_kg.6__2375__AT5G23800.1
Sequence
ATGGAGAGGC AGATTCCGAG TGAAAGTTTA TCTCTGAGTG AAGGTTGTGA AATCGAAATC TCTTACAAAA ACAATAGCAA TGAAAGCGTT TGGTACAAAG CCATTATCGA AGCAAAACCG CCAAAGAATT CTACATTCAA AGAACTCTGT GTTCGGTTGC TTAAGGAAGA CGTTTCGACT CCTCTTAACG AACTCAGAGA CAAAGTCTTG ATTCGACCCA TTCCGCCAAA AAACATGCAA GATTGCATCG ATATTGAGAT AGGCACCTTC GTCGACGCTG ATTATAAAGG TGCGTGGTGG ACTGGTCTTG TAGTCAAAGT GATTGATGAT GACAAGTTTT GGGTGTGTTT TGATTCACCA CCTGATATCA TTCAGTTTGA GAGAAAGCAT TTGAGGCCTC ATCTTCAGTG GGTCGATGAG AAGATATTTT CATGGTGGAT CATACGATCA ACACGAAATT CAGAGTTCTT GAAGCGGTTG TCTGAGGAGC CTATGTTTAG TCCTGGAACA ATGGTGGAAT TGTGTTCTAA GAGAGACGAA GGTGAAGTGG TTTGGGTTCC TGCAATGGTT TTTAAAGAGT TTAAAGAGAA TGATGAGTAT AGATATATTG TCAAGGATAG GCCTTTGATT GGCAGGAGTT ATAGGACAAG ACCCAACAAA ACGGTTGATT TGCGTAGTCT TAGGCCTATA CCGCCTCCTA TTCGGGTTAA AGAGTATCAA TTGGAGGATT ACATAGAGGT GTATCATGAT GGTATAGGAT GGCGTCAAGG ACGAGTTGTG GAAACTCGAG GAGGAGTGAT GGAATCTCTC TCTCAGAGAT GGTGTACATT GCTTATAGAG GCTACAAAGA AGCAATTAAC ATTCAAAAAA TCGGATCTTA GGCCTTTGAG GGTGTGGGAA GATGGCCTTT GGAAGACAAG GAAATCATCG TTAACTCAGG GATCAGGAGA TAAGACAGAG GCTGAAACTC AGAGAAAGAC ATTCCCCAAG AAGACACTTT CAAGGAATCA GAATGGTTCA GGAAACGATT CAACACGAGA GAATGAAAAT AGCAATCGAA AGAGGAAAAG AGAAGAAAAC CTTTGTTCTG TTTCTAGTGT TGAGGAAAAC AAAGTCAAGG ATACTACAAC AGTTTTGCTC TTTGAGAAGA AGTTACCAAT TTGGAAGATA CTTGATTCAA TGGAGGTATT TAAAGCAGTC CCACAAAGTC CTCATTTCAG CCCATTGGCG GAGATTAGAG AAGATTCCCG TGAAATGTTG GCGGTTGGTA TGATGCTTAC CTTTTCATGT TTACTTGAAC AAGTCAAAGC TCTGCAACAC GACGAGAACA TAAGCTCATT TATAAGCCTT AGTAATTCCT TTACCGAGTT AGAGACACAC GGGTTCAATG TACAAGTAGC TCAGTTGCGG ATCAATAAGT TGTTGACTCT TAGAGGTATG CAATCAAAGA AACTGGATGA ACTCAATGGT GCCAAGAAAG TGACTGCAGA TAAAGAGAGC GTAAAGGCTG AGAACGAACG CAAGATTCTC GAGCTGCAGA GGCTGAATGA GGAGATGGAC AAAGAGATAG CTCAGAGTAT GTCATGTGAA GCAAAGATTG TCCAACAGCT TGATGATATG AAGCTTGAGT TTCATGCAAC TGCATCGGCT CCATGGTAA 
Length1659
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9680640.. 9682933
Download Sequence
A.thaliana
AGI-codeAT5G23800.1
DescriptionDOMAIN OF UNKNOWN FUNCTION 724 10
TAIR curator summaryMember of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype
Alias[ATDUF10][DUF 10][DOMAIN OF UNKNOWN FUNCTION 724 10]
Gene coexpression
MR
MR Locus Description
29.7321 Ahg490707
34.2783 Ahg477194 Pentatricopeptide repeat (PPR) superfamily protein
34.6843 Ahg333544 IQ-domain 18
47.3709 Ahg892424 histone deacetylase 2C
48.8262 Ahg478773 Ribonuclease III family protein
49.4368 Ahg471841 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
68.374 Ahg496822 ankyrin repeat family protein
91.4604 Ahg949044 Nucleotide-sugar transporter family protein
92.0109 Ahg343373 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression