Detail



ID : Ahg489297

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489297|fgenesh2_kg.6__2431__AT5G24330.1
Sequence
ACCTCGGTCA AATCTCACAT TTATAATCTC TCACTCTCTC TTTCTCTGGT AAAATGGTAG CTGTGCGACG AAGAAGAACC CAAGCGTCAA ACCCTAGATC CGAACCACCG CAGCAATACA TGGCGGAAGA TTCCGATTCC GATTGGGATA CAGTCTGCGA AGAATGCAGC TCCGGGAAAC AACCTGCAAA GCTCCTTCTT TGCGACAAAT GCGATAAAGG GTTTCATTTA TTTTGTCTCA GACCAATCCT CGTTTCAGTT CCCAAAGGCT CTTGGTTCTG CCCTTCTTGT TCCAAACACC AGATCCCTAA ATCTTTCCCT CTTGTTCAGA CTAAGATCAT AGATTTCTTC CGGATTAAGC GGTCACCAGA CTCATCTCAA ATCTCAAATT CTTCAGATAG TATTGGGAAG AAACGGAAAA AGAATAGCTT GGTGATGTCA AAGAAGAAGA GGAGGCTTCT TCCGTATAAT CCTAGCAATG ATCCTCAAAG GAGACTTGAG CAAATGGCGT CTCTTGCTAC TGCGTTGAGA GCTTCCAACA CTAAGTTTAG CAATGAGCTT ACTTATGTAT CTGGAAAGGC TCCAGGATCT GCAAATCAAG CTGCTTTTGA GAAAGGAGGC ATGCAGGTTC TATCTAAAGA AGGCGTAGAG ACCTTAGCCT TGTGCAAGAA AATGATGGAC CTCGGTGAAT GCCCGCCACT TATGGTCGTC TTCGATCCTT ATGAAGGGTT CACAGTAGAG GCGGACAGGT TTATAAAAGA CTGGACCATA ATCACAGAGT ACGTTGGAGA TGTTGATTAT TTGAGCAACA GAGAAGATGA CTATGATGGA GACAGCATGA TGACTCTACT TCATGCCTCT GATCCTTCGC AATGTCTCGT TATTTGTCCT GACAGACGCA GTAACATTGC GCGGTTTATC AGCGGCATCA ACAATCACTC TCCAGAAGGA AGGAAGAAGC AGAACCTGAA GTGTGTGAGA TTCAACATCA ACGGAGAAGC TAGGGTTCTT CTCGTAGCTA ATAGAGACAT ATCTAAAGGG GAAAGATTGT ATTATGATTA CAACGGTTAT GAACATGAGT ATCCAACTGA ACATTTTGTA TAAGTTGCTT GTTCATCAAG AAAAAAC 
Length1127
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10016560.. 10018332
Download Sequence
A.thaliana
AGI-codeAT5G24330.1
DescriptionARABIDOPSIS TRITHORAX-RELATED PROTEIN 6
TAIR curator summaryEncodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.
Alias[ATXR6][SDG34][ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6][SET DOMAIN PROTEIN 34]
Gene coexpression
MR
MR Locus Description
16.4317 Ahg921039 RAD3-like DNA-binding helicase protein
27.4226 Ahg931557
28.1425 Virus1739
35.8887 Ahg936528 Transducin/WD40 repeat-like superfamily protein
44.2719 Ahg484971 Histone superfamily protein
65.3835 Ahg312610 cyclin b3;1
66.6183 Ahg948807 Helicase protein with RING/U-box domain
72.4569 Ahg477561
76.8765 Ahg490168 kinesin 5
83.2106 Ahg488576
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression