| Annotation |
|---|
| Description | jgi|Araly1|489727|fgenesh2_kg.6__2861__AT4G08150.1 |
| Sequence |
CCTTGACGAA TTCTATATTC CTAGTTCGTT TTTTCTTCCT CACATATATC ATTTTCAATT TATTTGGTTT TTCTTTGGGT GCAACTTCAC CTCACAATAT TTTTTCTTTC TTTTTTTTTT ATTTCGAGTT AGGCCTTTTT GATTTCATAG ATGAGTCGTC TAGTCATCTG GATTTGATGT GGTTTTACTC TTACAGAGAC CTTTGATTGA AATAAGAACA AAAGCAAGAA TACATACATC CTCTTCATCT TGCACCCATC CTTTTTATTT TTTTAGGGTT TTTTTTTTTT TTTAATTTTA TCCCATCAAT TTTTATATTC TTCTCTTTCT CTCTCTCAAG TTTTACTCAT CTGGGTATGG AAGAATACCA GCATGACAAC AGCTCCACTC CTCAAAGAGT AAGTTTCTTG TACTCTCCTA TCTCTTCTTC CAACAAAAAC AATAACACAA GCGATAACAA CAGCAATAAT AGTAGCAATT ATGGTCCTGG TTACAATAAT ACTAATAACA ACAATCATCA CCACCAACAC ATGTTGTTCC CACATATGAG CTCTCTTCTC CCTCAAAATA CCGAGAATTG CTTCCGATCG GATCATGATC AACCCAACAA CAACAACCCA TCTGTTAAAT CTGAAGCTAG CTCCTCAAGA ATCAATCATT ACTCTATGTT GATGAGGGCC ATCCACAATA CGCAAGAAGC TAACAACAAC ACCAATAATG ATAACGTAAG CGATGTTGAA GCCATGAAGG CCAAGATCAT TGCTCATCCT CACTACTCTA CCCTCCTACA AGCTTACTTG GACTGCCAAA AGATTGGAGC TCCACCTGAA GTGGTTGATA GAATTACGGC CGCACGGCAA GACTTCGAGG CTCGACAACA GCGGCCAACA CTGTCTGTGT CTGCCTCCTC TAGAGACCCG GAATTGGATC AATTCATGGA AGCATATTGT GACATGTTGG TTAAATATCG AGAGGAGCTA ACACGGCCCA TTCAAGAAGC AATGGAGTTT ATACGTCGTA TTGAATCTCA GCTTAGCATG TTGTGTCAGA GTCCCATTCA TATCCTCAAC AATCCTGCAG ATGGGAAAAG TGAGGGAATG GGATCATCAG ACGAAGAACA AGAGAATACC AGCGGAGGGG AAACAGAATT ACCGGAAATA GACCCGAGGG CGGAAGATCG GGAACTCAAG AACCACTTGC TGAAGAAGTA TAGTGGATAC TTAAGCAGTT TGAAGCAAGA ACTATCCAAG AAGAAAAAGA AAGGTAAACT TCCCAAAGAA GCACGGCAGA AGCTTCTCAC GTGGTGGGAG TTGCATTACA AGTGGCCGTA TCCTTCTGAA TCAGAGAAGG TGGCGTTGGC GGAATCAACG GGGTTAGATC AGAAACAAAT CAACAATTGG TTCATAAACC AAAGAAAGCG TCACTGGAAA CCGTCTGAAG ACATGCAGTT CATGGTGATG GATGGTCTGC AGCACCCACA CCACGCAGCT CTGTACATGG ATGGTCATTA CATGGGTGAT GGACCTTATC GTCTTGGTCC ATAAGACATC CAAAAGCGTT AGCCACAAAA TAACAACTTC TTGTTGCTTT CTTGTTACAA TTTATGTTTT GAACTCCCCT ACATCACTTT GCTACTTATA GCTTTATTGG TTTTACCCGT TTTGTAATGT ATTATGTCGT TCGGGGA |
| Length | 1687 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 17137167.. 17140309 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G08150.1 |
| Description | KNOTTED-like from Arabidopsis thaliana |
| TAIR curator summary | A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. |
| Alias | [BP][BP1][KNAT1][BREVIPEDICELLUS][BREVIPEDICELLUS 1][KNOTTED-like from Arabidopsis thaliana] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.94427 |
Ahg477013 | Terpenoid cyclases family protein |
| 10.6771 |
Ahg945488 | Protein of unknown function (DUF295) |
| 14.0712 |
Ahg949069 | transposable element gene |
| 18.868 |
Ahg352619 | |
| 19.2354 |
Ahg336658 | |
| 20.5426 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 20.5913 |
Ahg931752 | RmlC-like cupins superfamily protein |
| 20.7364 |
Ahg492774 | Transducin/WD40 repeat-like superfamily protein |
| 26.7208 |
Ahg355720 | |
| 30 |
Ahg480616 | F-box and associated interaction domains-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|