Detail



ID : Ahg489729

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489729|fgenesh2_kg.6__2863__AT4G08160.1
Sequence
CTTAATCTTC TTCGCTTAGA ACTTGCTATG GAGAAAAATA CAAACATGAA CCATACAAGT GATGATGACA ATGATAAGCA TCACACTAAC GAAGAACAGG AGAAGATAAT CCTAAACCCT AATTTTGAGG ATGGCCTGAA CAACTGGACT GGAAGAGCGT GCAAGATTGT CTTACACGAG TCCATGGACG GAGGGAAAAT CGTACCACTC TCGGGAAAAG TTTTCGCAGC GGCAACACAG CGTAAAGACA CATGGAATGG GATTCAACAG GAGATTTCAG GAAGATTTCA GAGGAAGCGT GTGTATGAAG TAACAGCAAT GGTTCGAATA TTTGGCAACA ATGTTACGAA TGCAACAGTA CAGGCGACTC TATGGGTCTT AAACGCAAAT CAACGTGAAC AATACATAGT CATTGCCAAT GTGCAGGCGA CTGATAAGAA CTGGGTGGAG TTGAAGGGTA AATTTGTAAT CCAGGGTTCG CCATCGAGGG TGATACTATA CCTTGAAGGT CCACCTTCAG GTTCTGACAT TCTTCTCAAC AGTTTAGTTG TTAAACATGC TAAAAGGAAT CGTCCATCGC CTCCTCCTTT CTATGAGAAT CCCGGTTTCG GAGTCAATAT AGTCGAAAAC AGTGAAGTGG TAAACGGGGC AACCCAACCA TGGTTCACCC TAGGAAACTG CAAGTTGAGT GTTGGACAAG GCGCTCCTCG CACTCTGCCC CCAATGGCGA GAGACACGCT CGGTCCTCGC AAACCTCTTG GCGGAAGCTA CATCCTCGTG ACTAACAGAA CGCAGACTTG GATGGGTCCG GCTCAGATGA TAACCGATAA AATCAAACTC TTCTTGACAT ATCAAGTTTC AGCGTGGGTC AAAATTGGTG TGGGAGTGAG TGGTAGTAGT ATGAGTCCTC AAAATGTGAA CATTGCACTT AGCGTCGATA ACCAATGGGT CAATGGAGGA CAAGTCGAGG CCACCCTTGG TGATACATGG CATGAAATCG GCGGAACCTT TAGGCTTGAG AAGCAGCCAC AAAACGTTAT GGTTTACGTT CAAGGTCCTG CAGCTGGTAT CGATTTGATG ATCGCGGGAC TGCAGATTTT TCCCGTGGAT CGTCGAGACC GTGTCAGATG TCTCAAAAGA CAAGTTGATC AGGTACGTAA GCGCGACATT GTCTTGAAAT TCTCCGGACT AGACGAGGAC TCCTCCGATT TGTTTCCTTA CATAGTGAAG GTTAAACAAA CATACAACAG TTTCCCTGTA GGAACATGCA TTAACAGAAC AGACATAGAC AATGAAGACT TTGTAGATTT CTTCACAAAG AACTTCAATT GGGCAGTGTT CGGAAACGAG CTTAAATGGT ACTCAACAGA AGCCGAACGA GGAAAGGTAA ATTACCAAGA CGCAGACGAC ATGTTAGATC TCTGCATTGG TAACAACATA AACGTTAGAG GACATTGCAT CTTCTGGGAA GTTGAATCCA CTGTTCAGCC ATGGGTTCGG CAGCTTAACA AAACCGATCT TATGAACGCG GTCCAAAGGC GTCTCACGGA TCTTCTGACA CGATACAAAG GTAAATTCAA GCACTACGAT GTCAACAACG AGATGCTTCA TGGTTCTTTC TATCAAGACA AACTTGGAAA AGGTGTAAGA GCACTTATGT TCAACATTGC ACACAAGCTT GATCCATCTC CTCTGCTTTT CGTAAACGAT TATCATGTTG AAGACGGGGA TGACACACGT TCGTCCCCCG AGAAGTATAT AAAACTTGTT CTTGATTTGG AAGCGCAAGG AGCAATAGTA GGAGGGATTG GGATCCAAGG ACATATAGAT AGCCCTGTTG GAGCTATTGT TTGCTCTGCT CTTGATAAGC TCTCTGTTCT TGGTCGTCCC ATTTGGTTCA CAGAGCTTGA TGTCTCTTCG AGTAATGAAT ATGTTAGAGG AGAAGATCTT GAAGTTATGT TGTGGGAAGC ATTTGCCCAC CCTGCAGTTG AAGGAATAAT GCTATGGGGT TTCTGGGAAC TATCTATGAG TAGAGAGAAC GCGAATTTGG TGGAGGGAGA AGGAGAAGTA AACGAAGCCG GGAAAAGATT TCTTGAGGTG AAAGAAGAAT GGTTATCTCA TGCATATGGG ATCATTAATG ATGAATCAGA GTTCACATTC AAAGGCTATC ATGGGACTTA CGCCGTTGAA GTTTGTACTC CGGCTGGGAT TGTTCTCAAA ACGTTCGTTG TCGACAAAGG AGACACTCCA CTTATTATAT CCATTGATCT CTCTTGTTTG TGATGTTTTT GTTAACATAT GTACACAAAA TTATGTTATG TC 
Length2322
Protein Sequence
Protein Residue
Map Locationscaffold_6: 17168205.. 17171685
Download Sequence
A.thaliana
AGI-codeAT4G08160.1
Descriptionglycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
TAIR curator summaryEncodes a putative glycosyl hydrolase family 10 protein (xylanase).
Alias
Gene coexpression
MR
MR Locus Description
16.4317 Ahg325159 cytochrome p450 79a2
20.7123 Ahg487528 HXXXD-type acyl-transferase family protein
64.2106 Ahg333289 RNI-like superfamily protein
73.0753 Ahg937856 Protein of unknown function (DUF579)
97.5295 Ahg312221 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression