Detail



ID : Ahg489943

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489943|fgenesh2_kg.6__3077__AT4G11050.1
Sequence
ATGGGTTCTA CGACCACCAT TTCGATTCTT GTTCTTCTTC TTCTAGGGTT GGTTCAACTT GCAGTTTCAG GGCATGACTA TAAACAAGCT CTAAGCAAAA GCATTCTCTT CTTTGAAGCT CAGAGATCAG GACACCTCCC TCCTAACCAG AGAGTTTCAT GGCGATCTCA TTCCGGTCTT TACGATGGCA AATCAAGTGG CGTGGATCTA GTGGGAGGAT ATTATGACGC CGGAGACAAT GTGAAATTCG GGCTCCCAAT GGCTTTCACG GTGACAACAA TGTGTTGGAG CATCATCGAA TACGGTGGCC AGCTGAAATC TAACGGCGAA CTTGGTCATG CCATTGACGC CGTTAAGTGG GGAACTGATT ATTTCATTAA AACCCACCCT GAACCTAACG TCCTCTATGG AGAGGTGGGA GATGGTAAGT CGGACCATTA TTGTTGGCAA AGGCCAGAGG AAATGACCAC TGATCGTAAG GCTTACAAAA TTGACCGGAA CAATCCCGGT TCAGATTTAG CCGGAGAAAC CGCTGCCGCA ATGGCTGCGG CTTCCATCGT TTTCCGCCGC TCTGATCCAT CATACTCTGC TGAGCTACTC CGTCACGCCC ATCAGCTATT TGAATTTGCG GACAAATACA GAGGCAAATA TGACAGTAGC ATTACCGTGG CACAAAAATA CTACCGATCC GTCAGCGGTT ACAATGATGA ATTACTATGG GCTGCTGCAT GGTTATACCA AGCAACCAAT GATAAATATT ATCTAGATTA CCTCGGCAAG AATGGTGACT CAATGGGCGG TACGGGCTGG TCGATGACTG AATTTGGTTG GGACGTTAAG TATGCTGGCG TTCAAACCCT TGTCGCTAAG GTTTTGATGC AAGGGAAAGG TGGAGAACAC ACTGCCGTGT TCGAGCGGTA CCAACAGAAA GCAGAACAGT TTATGTGTTC GTTGTTAGGT AAAAGCACGA AGAACATTAA GAAAACTCCC GGCGGTCTAA TTTTCCGACA AAGCTGGAAC AATATGCAGT TTGTCACGAG TGCCTCTTTC TTAGCCGCCG TTTACTCCGA CTATCTCTCT TCATCCAAAA GAGATCTCCG TTGTTCTCAA GGAAACATTT CTCCATCCCA ACTCCTAGAT TTCTCAAAAT CACAGGTGGA TTACATTCTC GGAGACAACC CTAGAGCGAC AAGTTACATG GTCGGATACG GAGAGAACTA TCCACGACAA GTTCATCATC GTGGTTCGTC TATTGTCTCC TTCAATGTCG ATCAAAAGTT CGTGACTTGC CGTGGCGGTT ACGCCACATG GTTTAGCCGC AAAGGAAGCG ATCCGAATGT TTTAACCGGA GCTATAGTGG GTGGACCCGA CGCATACGAT AACTTCGCTG ACCAACGGGA CAATTATGAG CAAACCGAAC CAGCAACTTA CAACAACGCG CCACTTCTTG GTGTACTAGC CCGGTTGATT TCCGGTCCGA CCGGTTTTGA CCAGCTGCTT CCCGGTGTTA GTCCGACTCC AAGTCCGGTT ATCATAAAAC TAGCACCGGT ACCAAAGAAG AAACCCACAA CACCTCCTGT AGCTTCTTCT CCTAGTCCCA TTACCATATC GCAGAAGATG ACACTCTCAT GGAAGAACGA GGGAAAGGTG TACTATCGAT ACTCAACAAG ATTAACCAAT AGATCTACAA AAACATTAAA AATTTTGAAG ATATCAATCA CCAAGCTCTA TGGTCCTATA TGGGGTGTGA CGAAAACCGG AACTTCATTC ACCTTTCCCT CATGGATGCA ATCGTTACCG GCAGGCAAAA GCATGGAATT TGTCTATATC CACTCAGCAG CTTCTCCGGC AGATGTCTTG GTCTCTAACT ATTCTTTGGA GTGA 
Length1884
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19556012.. 19559784
Download Sequence
A.thaliana
AGI-codeAT4G11050.1
Descriptionglycosyl hydrolase 9C3
TAIR curator summary
Alias[AtGH9C3][GH9C3][glycosyl hydrolase 9C3]
Gene coexpression
MR
MR Locus Description
12.6886 Ahg950383 Auxin efflux carrier family protein
19.2354 Ahg947181 ornithine-delta-aminotransferase
21.6333 Ahg915018 RING/U-box superfamily protein
22.1811 Ahg907348
23.6643 Ahg485653 purple acid phosphatase 21
27.4408 Ahg917658 subtilase 4.13
27.6767 Ahg351609 Protein of Unknown Function (DUF239)
28.7228 Ahg493720 Leucine-rich repeat protein kinase family protein
30.5287 Ahg904884 RNA-binding protein
32.4962 Ahg331346 TRICHOME BIREFRINGENCE-LIKE 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression