Detail



ID : Ahg490227

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490227|fgenesh2_kg.6__3361__AT4G03330.1
Sequence
AAACCCTTGA CTGGTTCTAA ACACAGCTCA TAATATGTCT ATTTAGTATT TAAAGGTCTC TCTAGCTTCA TGCCAACCAT CTAAACCACC ATTAATGTTC CTCTGCCCAT TTCCAAGAAA TTAGAGCTTA TTTTTCTCTA ATTTCTTAAT CGTCGCCATG AACGATCTAA TCTCTAGTTC ATTCAAGAGA TACACAGACT TAAACCACCA AGTCCAACTC GATGACATCG AGTCTCAAAA TGTTTCTCTC GATTCAGGCA ACCTCGATGA GTTCTTTGGA TATGTCGAGA GTGTCAAAGA AGACATGAAA GCTGTCGACG AGATTCATAA GCGTCTCCAA GATGCTAATG AAGAGTCCAA GACCGTACAT GACTCCAAGG CCGTTAAAAA GCTTCGTGCT CGTATGGATT CGAATGTTAC AGAGGTCTTG AAACGTGTCA AGATGATAAA GTCGAAGCTT GTGGCTTTGG AGAAATCAAA TGCTGCGCAG AGGAAAGTCG CTGGTTGTGG TCCTGGCTCG TCTGCTGATC GGACAAGAAC ATCGGTCGTT AGTGGATTGG GGAAGAAGCT TAAAGACATG ATGGATGATT TTCAGAGACT AAGAACCAAA ATGGCTACTG AGTATAAAGA AACAGTTGAG AGACGGTACT TCACTGTAAC GGGGCAAAAA GCGGACGAAG AGACAGTCGA GAAGCTCATA TCGAGCGGAG AGAGTGAACG TTTTCTCCAA AAAGCAATAC AAGAGCAAGG TCGCGGACAA ATAATGGACA CATTATCAGA GATTCAAGAA CGACACGACA CGGTTAAAGA GATAGAACGG AGTCTGTTAG AGCTGCACCA AGTGTTCCTC GACATGGCTG CTCTTGTTGA AGCTCAAGGG AATATGCTCA ACGACATCGA ATCAAATGTC TCAAAGGCGA GCTCTTTCGT CATGAGAGGG ACTGATCAAT TGCACGGGGC TAAAGTACTT CAGAGGAACT CAAGGAAATG GACTTGTATT GCCATTATCC TCGCTATTGT ACTTGTTATT GTGATTCTTT TCCCAATCCT CTATACCAAT GTACTTAAAC CTTGATTTCA AAAGGCAACT TCTTGTTTTC TTCAAACTCT TTTTGTTAGA GCCCTTTCAA TTTCTTGTAT TGAATCCAGA GCTGAAGCGA GAGTTTAATT TAAAGCTCTC TCTAACCATT CTTGCTATTG TAATTGCTTT GTATC 
Length1215
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21805897.. 21807277
Download Sequence
A.thaliana
AGI-codeAT4G03330.1
Descriptionsyntaxin of plants 123
TAIR curator summarymember of SYP12 Gene Family
Alias[ATSYP123][SYP123][syntaxin of plants 123]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg480435
16.6132 Virus0498
20.3961 Ahg887837 RNA-binding (RRM/RBD/RNP motifs) family protein
21.6795 Ahg472336
22 Ahg938157 oligopeptide transporter 2
25.0998 Ahg907079
25.4755 Ahg938597 Thioredoxin superfamily protein
30.0666 Ahg920688
30.8221 Ahg493225
41.2795 Ahg896265
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression