Detail



ID : Ahg493225

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493225|fgenesh2_kg.7__2658__AT4G16515.1
Sequence
ACACCAATTA ACAACATTTC AAACTATTTT TGTCTTGCTC TAGTCTCATC TCCCTGTATA CAGACACAGC TCATATTACA AGTATCTTAA GAACAAGAAG AAGAAGAAAA GAAGTCATGT CTTGCTCTGG GAGGAGTGGA CTCGTGATGG TGTTTTGTTT CATTCTTCTG CTTTTGTCTT CCAATGTTGG ATGTGCCGCT GCCGCTCGTC GGTTAGGGTC TCATAAGCAT CATCACAAGG TTGCTTCTTT GGACGTCGTC AATGGTGGAG AAAGGAGGCG AGCGTTGGGT GGAGTCGAGA CAGGGGAAGA AGTAGTGGTC ATGGATTATC CTCAGCCTCA TCGTAAGCCT CCCATCCACA ACGAGAAGTC TTAATTACCC GATCCATATA TGCTCCTCTC TAAATATATC ATACTGTTAT ATGCATATGC ATTCACCATG TTGGTGGTTG TAATGACTCT TGTGCTATCT ATATATATAT TCATGACCAA CTTCTTTGTT CTCT 
Length504
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11264543.. 11265036
Download Sequence
A.thaliana
AGI-codeAT4G16515.1
Description
TAIR curator summaryEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Alias[CLEL 6][GLV1][RGF6][CLE-like 6][GOLVEN 1][root meristem growth factor 6]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg900876 Carbohydrate-binding X8 domain superfamily protein
29.4449 Ahg907761 Arp2/3 complex, 34 kD subunit p34-Arc
30.8221 Ahg490227 syntaxin of plants 123
53.2729 Ahg491571 glutamate receptor 2.1
69.728 Ahg484409 Polyketide cyclase/dehydrase and lipid transport superfamily protein
83.5165 Ahg906186
84.534 Ahg325766 CCCH-type zinc fingerfamily protein with RNA-binding domain
84.7467 Ahg930412 F-box associated ubiquitination effector family protein
85.6505 Ahg925500
88.4873 Ahg318477 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression