Detail



ID : Ahg490380

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490380|fgenesh2_kg.6__3514__AT4G01970.1
Sequence
ACCATTCTCT GTTTTCATTT CCTCTGTTTA GCAAGCTTCC TCTGTTCTCT CATGGCTCCA CTTAACGATT CTCTGTCATC AATCATCGAT GTCATCGAAT CCAAACCTCT TTGTGTTCCA CAAACTAAGC CAATATTGCA ACCAAACTCT TTTAACCTAT CCCAAGGGAC TCTTCGTGCC AAAGACTCTT CTCCAATCCT CTTTGATGTT CCTCAAAACG TAACTTTCAC ACCATTTTCA TCTCACTCCA TATCCACTGA TGCTCCTCTG CCAATCCTCC TCCGAGTTCA AGCCAACGCT CACAGAGGAG GGTTTCTTGG ATTCACCAAA GAATCACCCT CAGATCTTGC CACGAACTCT TTGGGAAGAT TCGAAGACAG AGATTTCCTC AGTCTTTTCC GGTTCAAAAT GTGGTGGTCG ACGGCTTGGA TCGGAAAATC CGGGTCGGAT CTTCAAGCCG AGACACAATG GGTGATGCTA AAGATTCCTG AGATCGATTC CTACGTGGCC ATCATACCAA CCATAGAAGG ATCTTTTAGG GCTTCACTTA ACCCTGGCGA AAAAGGTAAC GTCTTGATTT CTGCAGAGAG TGGCTCTACT AAAGTAAAAG AGTCGTCTTT CAATTCCATT GCCTACATTC ACATTTGTGA CAATCCTTAT AACCTCATGA GAGAGGCTTT TAGTGCACTT CGTGTTCATA TGAACACTTT CAAGCTTCTA GAAGAGAAGA AGCTTCCGAA AATCGTCGAT AAGTTTGGAT GGTGCACTTG GGATGCTTGC TACTTGACCG TTGATCCTGC AACCATTTGG ACCGGAGTTA AGGAGTTTGA AGATGGTGGT GTATGTCCGA AGTTTATCAT CATTGATGAT GGATGGCAAA GTATAAACTT TGATGGTGAT GAGCTGGACA AAGACGCTGA GAATCTTGTT CTTGGTGGAG AGCAAATGAC TGCGAGGCTT ACCAGCTTCA AGGAGTGTAA GAAGTTTAGA AACTATAAAG GTGGATCCTT TTTATCATCT GATGCGTCTC ACTTTGATCC TCACAAGCCG AAGATGATTA TCTACAAAGC AACCGAGCGA ATTCAGGCGA TTATATTGAG ACGGAAGTTG GTTAAGGAAT CTGGGGATCA AGATCTACAC GAACTTGATG AAAAGATCAA GATTTTGAGC GAAGAACTCA ACGCAATGTT TGATGTTGAG AAAGAAGAGT CTTCGGGTTC TGAGGATGTT TCAGGCTCAG GTATGGCGGC TTTCACTAGG GATTTGAGGT TGAGGTTTAA GGCTTTAGAT GATATATATG TGTGGCATGC TCTTTGTGGT GCTTGGAATG GTGTTAGGCC TGAAACCATG ACGGATTTGG AAGCCAAGGT TGTTCCTTTT GATCTTTCAC CTGGTCTAGA TGCTACGATG ACTGATCTCG CAGTCGACAA GATTGTAGAA GCTGGGATTG GTCTAGTTCA TCCTTCTAAA GCTCATGAAT TCTACGATTC GATGCATTCT TATCTTGCTA GTGTTGGTGT TACAGGAGCC AAGATTGATG TTTTCCAAAC CTTAGAGTCA GTAGCAGAAG AACATGGAGG ACGAGTGGAG CTTGCTAAAG GTTACTACGA TGGTCTGACC GAATCCATGA TCAAGAATTT CAATGGAACT GAAGTCATTG CAAGTATGCA GCAGTGCAAT GAGTTCTTCT TCCTTGCCAC AAAGCAAATC TCTATTGGCA GAGTTGGTGA TGATTTTTGG TGGCAAGACC CATATGGTGA CCCACAAGGA GTGTATTGGC TACAAGGAGT TCACATGATT CACTGTTCTT ACAACAGTTT TTGGATGGGT CAAATGATTC AACCCGATTG GGACATGTTC CAATCAGACC ATGTCTGTGC CGAGTACCAC GCTGCATCTC GAGCCATCTG CGGTGGGCCT GTCTATCTCA GTGACCATCT TGGCAAAGCC TCACATAACT TTGATCTCAT CAAGAAACTT GCATTCTTTG ATGGTACCAT CCCAAGGTGT GTCCACTATG CTCTTCCTAC TAGAGATTCG CTCTTCAAGA ACCCTTTGTT TGACAAAGAA TCAATCCTCA AGATCTTCAA CTTCAACAAG TTTGGAGGAG TAATTGGAGC ATTTAACTGT CAAGGTGCTG GGTGGAGCCC AAAGGAGCAT AGGTTCAAAG GATACAAAGA ATGTTACACG ACAGTTTCGG GAACAGTTCA TGTCTCGGAC GTCGAATGGG ATCAGAACCC AGAAGCTGAA AGTTCTCAGG TGAGCCACAC CGGAGATTAC TTGGTTTACA AGCAACAATC CGAAGAAATT CTTTTCATGA ACTCAAAATC AGACGCGATC AAGATAACTC TAGAGCCATC CGCATTTGAC CTATTCAGTT TCGTGCTAGT CACGGAACTG GGAAGTTCAG GGGTTAGATT TGCACCTCTA GGGTTGATCA ACATGTTCAA CTGCGTCGGA ACTGTTCAAG AGATGGAGCT TACTGGTGAT AACAGCATAA GAGTTGACTT GAAAGGCGAA GGAAGATTCA TGGCGTATTC GAGTTTAGCT CCGGTGATGT GTTACTTGAA CAACAAGGAA GCTGAGTTTA AGTGGGAAGA AGAAACTGGG AAACTCAGTT TCTTTGTTCC TTGGGTTGAA GAATCTGGAG GCATCTCTCA TCTGTCTTTC ACCTTTTAAT GATTTGTTTT GATTTTGTTT TTCGTTTTCC TTTTCAGAAG TTGGGTTGTC AATTTCTGTT CGGTCTTTTA CTTTTCAATT TGGAGACTTA TCATAAATGG ATTTTCTGTG TCGGTT 
Length2796
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22550320.. 22553760
Download Sequence
A.thaliana
AGI-codeAT4G01970.1
Descriptionstachyose synthase
TAIR curator summaryEncodes a putative stachyose synthetase.
Alias[AtSTS][RS4][STS][stachyose synthase][raffinose synthase 4]
Gene coexpression
MR
MR Locus Description
11.7898 Ahg930374
22.8035 Ahg472260 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
33.0454 Ahg921385
39.1918 Ahg493352 HXXXD-type acyl-transferase family protein
39.598 Ahg492896 iron regulated transporter 2
42.9069 Ahg947898
48.4045 Ahg495065 ethylene response factor 110
49.3559 Ahg892007
51.614 Ahg940379
52.7636 Ahg947711
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression