Detail



ID : Ahg492896

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492896|fgenesh2_kg.7__2329__AT4G19680.2
Sequence
AATACTAATG GCTACTACCA AGCTCGTCTA CATTCTCCTC ATACTATTCA CCTTCTCCGT ATCTCCAGCG ATCGCAACGG CCCCGGAACA TTGCGATAGC GGCTCGGAGA ATCCGTGCAT CAACAAAGCT AAGGCCTTAC CACTCAAAAT CGTAGCCATT GTAGCCATCC TTACGACAAG CTTGATAGGC GTAACCTCTC CTCTTTTCAG CCGTTACATT TCGTTCCTCC GTCCTGATGG CAATGGTTTC ATGATCGTAA AATGTTTTTC TTCTGGAATC ATCCTTGGAA CCGGCTTCAT GCACGTCTTG CCTGACTCTT TCGAGATGTT GTCATCGAAA TGTCTTAGCG ATGGTCCGTG GCATAAGTTC CCTTTTGCGG GTTTTGTTGC TATGATGTCC GGTCTAGTCA CTCTAGCCAT TGACTCCATT ACCACCAGCC TTTATACCGG TAAGAACTCG GTCGGGCCAG TGCCTGACGA GTATAGCATT GATCAAGAAA AGGCGATTCA CATTGTAGGT CACAATCACA GCCACGGTCA TGGAGTAGTG CTATCAACTA AAGATGATGG ACAGCTTTTG CGCCACCGAG TCATTGCCAT GGTATTGGAG CTTGGGATTT TATTTCATTC AGTGGTCATT GGACTATCTC TAGGAGCAAC TAATGATGCA TGTACCATTA AAGGACTCAT CATAGCCCTG TGCTTCCATC ACTTGTTCGA AGGCATGGGT CTTGGTGGCT GCATCCTCCA GGCAGATTTT ACAAATGTGA AGAAGTTCTT GATGGCATTC TTTTTCGCTG GAACAACACC TTGTGGTATC TTTCTAGGAA TCGTATTGTC GAGTATCTAT AGAGATAACA GTCCAACCGC GTTGATTACG ATTGGACTGT TAAATGCTTG CTCGGCCGGA ATGCTCATCT ACATGGCCCT CGTCGACCTT CTAGCTACCG AGTTCATGGG ATCAATGCTC CAAGGTAGCA TCAAACTTCA GATCAAGTGC TTCATGGCGG CTTTGCTCGG CTGCGCCGTT ATGTCGGTCG TCGCCGTGTG GGCTTAAACA CTATATCAAC ATAATTAATA AATTATTTGA TTTATTATTC AAGGCGACAA ATACTTTCGC CTTTGTACAT T 
Length1131
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9430598.. 9431863
Download Sequence
A.thaliana
AGI-codeAT4G19680.2
Descriptioniron regulated transporter 2
TAIR curator summaryencodes an iron transporter whose expression is induced by iron and zinc deficiency. Gene is specifically expressed in the external cell layers of the root subapical zone.
Alias[ATIRT2][IRT2][IRON REGULATED TRANSPORTER 2][iron regulated transporter 2]
Gene coexpression
MR
MR Locus Description
18.8414 Ahg891090 Eukaryotic aspartyl protease family protein
20.199 Ahg949683 F-box and associated interaction domains-containing protein
30.7571 Ahg912947 Polyketide cyclase/dehydrase and lipid transport superfamily protein
38.2623 Ahg476984 pumilio 7
39.598 Ahg490380 stachyose synthase
40.0749 Ahg897568 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
41.0853 Ahg486726 VANGUARD 1 homolog 2
41.5692 Ahg899351
47.1487 Ahg921417 Domain of unknown function DUF220
49.1528 Ahg491907 ROP-interactive CRIB motif-containing protein 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression