Detail



ID : Ahg490453

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490453|fgenesh2_kg.6__3587__AT4G01160.1
Sequence
ATGGATCTCT CGCTCTCCGG TGGGGATTTT AGGTTTGCTT TCAACAATGT TAAATTTTCC GATCGTCTTC TTCGGATCGA GATCACCCGT AGCAGCGGTG CCGGTGATGA GGTTAGCTGT TCTAGTGTCG TCGATTGGGC TAGGGATCGC AAACGCAGAA GAGAGGAAGA TAACAGCAAC AACAAAAAAC ATGAAGAAGC ATTGGTAATG GCTGAACAAG AACCAAAATC AGGTGGTGAA GATCATGAGA TTGAGAGGGT CACTAATAAT ACTTCAGTTC TAAAAGTTAA AGAATTACAT ATAAGCTCTG CAATTTTGGC AGCCAAAAGT CAATTTTTCT TCAAGCTATT CTCTAATGGA ATGCTTGAGT CAGAGCAAAA ACAATTGACA TTGAAAATAG ATGCTTCTGA GGAAGCTGCT GTAATGGAGC TCTTGAACTT CATGTATAGC AATTCACTAT CAGTCACGGC GCCCTCTGCT TTACTCGATG TGCTAATGGC GGCCGACAAG TTTGAGGTTG CTTCGTGTAT GAATTATTGC AGCCAATTGT TGCTCAAAAT GCCCATGACA TTAGATTCTG CATTGCTTCT TCTTGATCTT CCTTCGAGTT TGCTAATGGC TGATTCAGTT AAGCCTTTAA CCAATGCTGC AAGGCAGTTC ATCGCCTCTC GTTACAAGAA TATGTCCAAG ATTACAATGG AGGAGTTGAT GGCTTTACCG TTAGTAGGTA TCGAGGCGAT GCTAGCGAGT GACGGTCTAG AGATCCAATC TGAAGACATT CTATACGAAG TTGTCTTGAA ATGGGTAAAA TCAAATTACT CAGTTGTCGA AGAACGCCAA GAAATACTAG GCTCTCACCT CGCTCGCTAC ATCCGTTTCC CTCACATGAC AATTGGCAGA CTCAAGCATA TCTTGTCCTC AAACGACTTC ACACCTTCTG TGGCATCAAA ACTAGTCATT GAAGCTCTCT TCTTCAAAAC AGAATCGTTG GCCCACCAAC GCTTTCTACT AGCCCATGAA CAACCCGCCT CAACCAGCCG CTGGTTTGCT AAACGAGCCT ATGTACAAAG ACCCATAAAA ATTGTAGAGT TCGCGGCTCC TCGGCCCCAA TGCATCATTT ATTTGGACTT AAAACGGAAA GAATGTGAAA GCATCTATCC AGCAAGCAGG ATATCATCTC AACCGTTTAC CTTAGGAGGA CAAGGGTTCT TTCTCTCAGC TCAATGCAAC ATGGACCATC TATGTATAAT CCACTGTTTT GGATTGTTTA TTGGGATGCA AGAAAACGGG TCAGCGAGTG CGACTGTGAC TGTGGACTAC GAATTTTCAG TAAGGTCAAA GCCAACGATG GAATTTGTGG GAAAATTCAA AGGAAACTAT ACGTTCAGCA GAGGTAAAGC TGTTGGATGC AGAAACTTGC TAGCTATACC ATGGGATATT TTCACAGCCA AGAATTGTCC CTACTTCATC AATGATGTTC TTCATCTCCG GGCCGATCTC TCCATCCGCC TTTAG 
Length1515
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22954964.. 22957084
Download Sequence
A.thaliana
AGI-codeAT4G01160.1
DescriptionBTB/POZ/Kelch-associated protein
TAIR curator summary
Alias[LRB3][light-response BTB 3]
Gene coexpression
MR
MR Locus Description
10.8167 Ahg327156 glycosyl hydrolase 9B14
22.4277 Ahg315689
23.3024 Ahg924765 PA-domain containing subtilase family protein
33.5559 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
38.3406 Ahg904360 Protein of unknown function (DUF567)
39.3446 Ahg926320 Protein of unknown function (DUF1163)
40.2492 Ahg934440 Protein kinase superfamily protein
40.4969 Ahg913614 gibberellin 20-oxidase 5
41.3521 Ahg491864 Protein of unknown function (DUF626)
49.051 Ahg355996
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression