Detail



ID : Ahg941057

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941057|scaffold_601601.1
Sequence
TCAATTTTTA AGTTCGATTG ATGTCCAGTG CTCAAACCCC ATTGTTCTTG GCAAATCAGA CTAAGGTATT CGATCACTTG ATTCCATTGC ATAAACCCTT TCTTTCTTCT CCGAACCCAG TTTCCCAATC CTTCCCTATG TGGAGAAACA TTGCTAAACA AGCAATTTTG AGGTCAGCTA CTAGATCAAA CGTCGGTTCC AAAACTCGTG GCTTTCTTGG GTCTTCTCCG GAGTCCAAAA ATTTGAGCTT TCGGTTTCCG GTGTTCGGTT CCATCTCGGG ATCGCCATGT TACGAAATGG GTTTTCGTAG TTTAAGTGGG ATCACGAGGC GAGATGAATT TTCCAAGAGC GAGAGGTGCC TTAATGGGAC TTTGGCTAGA GGGTACGCGA GTGTAGCCGA AGAGGTCTTA TCAACAGATG TTGAGGAAGA GCCTGAGGTA CATGAATTGT TGAAGGAGAT GAAGAAAGAG AAGAAGAGAG AGAGTCATCG TTCGTGGAGG ATGAAGAAGC AAGATCAATT TGGAATGGGT CGTACCAAGT TTCAGAATTT ATGGAGAAGA CAAGTTAAGA TCGAGACTGA AGAATGGGAA AGAGCTGCTG CAGAGTACAT GGAGCTTTTG ACGGATATGT GTGAGCAAAA GCTTGCCCCT AATCTGCCTT ATGTGAAGTC GTTGTTTCTG GGTTGGTTCG AACCATTACG AGATGCAATT GCTAAAGACC AGGAATTGTA TAGATTAGGG AAGAGCAAAG CAACTTATGC ACATTACCTT GATCAGTTGC CTGCCGACAA GATATCTGTT ATTACAATGC ACAAGTTGAT GGGGCATTTG ATGACTGGTG GTGATAACGG TTGTGTTAAG GTTGTTCATG CTGCGTGTAC AGTAGGCGAT TCCATTGAAC AAGAGATAAG AATATGCACA TTCTTGGATA AGACCAGGAA GAAAAAAGGG GATGACAATG AGGAGAGCGG GGAAGTTGAA AATGGAACTT CTATGAAGGA ACAAGATAAG TTAAGAAAAA AGGTCAATGA GTTGATAAAG AAACAGAAGT TGTCAGCAGT TAGAAAGATC TTGCAGTCAC ATGACTATAC AAAACCGTGG ATCGCAGATG TTAGGGCTAA GGTTGGAAGT CGTCTAATAG AGTTACTCGT AAGAACAGCT TATATACAGT CTCCAGCTGA TCAGCAGGAT AATGATCTGC CTGATGTCCG ACCTGCATTT GTGCATACCT TCAAGATAGC GAATTCTGGG AGAAAATATG GTGTAATCGA GTGTGACCCT TTGGTCCGAA AAGGCTTGGA AAAAAGTGGG AGATATGCAG TGATGCCATA CATGCCAATG CTGGTTCCTC CTCTCAAATG GTCGGGATAC GACAAAGGTG CTTACTTGTT CTTAGCGTCT TATATAATGA AAACTCATGG ATCCAAGCAA CAAAGAGAAG CACTTAAGAG CGCACCTAAA GGACAACTAC AACCAGTCTT TGAGGCCCTG GATACGCTTG GAAGTACTAA ATGGAGGGTA AATAAGCGAG TCTTAACGGT TGTAGATAGG ATATGGAGCA GTGGCGGATG TGCTGCTGAT CTGGTGGATC GCAGCGATGT TCCTTTACCA GAAAAGCCTG ATACTGAAGA TGAGGGCATT CTTAAGAAAT GGAAGTGGGA AGTCAAATCT GCTAAAAAGG TGAACAGCGA GAGACATTCT CAGCGCTGTG ACACAGAACT CAAGCTTTCG GTAGCACGGA AAATGAAAGA TGAGGACGCT TTTTACTATC CCCACAATAT GGACTTCCGG GGACGTGCAT ATCCCATGCC CCCGCACTTA AATCATCTTG GCTCTGATTT GTGTCGGGGT GTTTTGGAGT TTGCTGAGGG AAGGCCTCTG GGAATTTCAG GCTTACGCTG GCTAAAGATA CACTTAGCAA ACTTGTATGC TGGTGGTGTA GATAAGTTAT CACTTGACGG ACGGCTAGCT TTCACTGAAA ATCACTTGGA TGACATATTT GATTCGGCAG ACAGACCACT TGAAGGAAGC AGATGGTGGC TGCAGGCTGA AGACCCATTT CAGTGCTTGG CTGTCTGCAT AAATCTGACT GAAGCTCTGA GAAGCCCATC CCCAGAGACA GTTCTGTCAC ATATTCCTAT ACATCAGGAT GGTTCCTGCA ATGGTTTACA GCATTATGCC GCTCTTGGGA GAGACACATT AGGAGCAGAA GCTGTTAATC TAGTTGCAGG TGAGAAGCCG GCAGATGTTT ATTCAGGAAT AGCTACCAGG GTTCTTGATA TTATGCGCCG AGATGCAGAC AGAGATCCTG AAGCTTTTCC AGATGCATTG CGTGCAAGAA AATTACTTAA CCAGGTGGAT CGTAAGCTTG TAAAGCAGAC GGTTATGACA TCAGTCTATG GTGTCACCTA CATTGGCGCT CGGGATCAAA TAAAGAGAAG GTTGAAGGAA CGAAGTGATT TTGGTGAGGA AAAGGAAATT TTTGGGGCTG CTTGCTATGC AGCAAAGGTA ACATTAGCTG CTATAGATGA GATGTTTCAA GCTGCACGCG CCATCATGCG TTGGTTTGGT GATTGTGCGA AGATTATTGC TTTAGAAAAT GAAACAGTTC GATGGACAAC CCCATTGGGT CTTCCTGTTG TACAACCTTA CCACCAAATG GGAACAAAAC TCGTAAAGAC ATCCCTCCAG ACCTTATCGC TTCAGCATGA AACTGATCAG GTCATTGTGA GGCGACAAAG GACAGCTTTT CCTCCAAATT TTATTCACTC CCTGGATGGG TCTCATATGA TGATGACTGC AGTTGCCTGC AAAAGAGCAG GCATGTGTTT TGCAGGAGTT CATGACTCTT TTTGGACACA TGCGTGTGAT GTGGATAAAT TAAACAGAAT ACTACGGGAA AAGTTTGTTG AGCTGTACTC GCAACCGATA CTAGAGAATT TGCTGGAGAG CTTTGAGCAA TCGTTTCCGC ATTTAGACTT TCCTCCTCTG CCTGAACGAG GAGATTTAGA TTTAAAAGTG GTGTTAGATT CACCTTATTT CTTCAACTGA AAAAGAAAGC AATGCCTTCC 
Length3070
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6129922.. 6135837
Download Sequence
A.thaliana
AGI-codeAT5G15700.2
DescriptionDNA/RNA polymerases superfamily protein
TAIR curator summaryNucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg949105 Glutathione S-transferase family protein
4 Ahg318448 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.14143 Ahg944981
9.94987 Ahg497128 Homeodomain-like transcriptional regulator
10.4881 Ahg477959 ARM repeat superfamily protein
12.6095 Ahg922194 GTP-binding family protein
12.8841 Ahg475515 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain
14.4914 Ahg483978 B-box type zinc finger protein with CCT domain
14.6969 Ahg476028 male gametophyte defective 3
17.8885 Ahg490543 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression